Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC025647.1-201ENST00000517879 253 ntBASIC0.43□□□□□ -2.34
CD40LGP29965 AP003072.2-201ENST00000527756 676 ntBASIC0.43□□□□□ -2.34
CD40LGP29965 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.43□□□□□ -2.34
CD40LGP29965 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.43□□□□□ -2.34
CD40LGP29965 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.43□□□□□ -2.34
CD40LGP29965 AL162424.1-201ENST00000602325 221 ntBASIC0.43□□□□□ -2.34
CD40LGP29965 Z84480.1-201ENST00000605131 311 ntBASIC0.43□□□□□ -2.34
CD40LGP29965 MTND4P5-201ENST00000435821 1374 ntBASIC0.43□□□□□ -2.34
CD40LGP29965 RNU6-199P-201ENST00000362954 107 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 RNU5B-2P-201ENST00000363036 113 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 Y_RNA.116-201ENST00000363292 103 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 Y_RNA.122-201ENST00000363331 96 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CD40LGP29965 MRPL42P3-201ENST00000401492 326 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 AL451046.2-201ENST00000403074 277 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 RPS3AP3-201ENST00000411933 242 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 MTCO2P8-201ENST00000412213 658 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 MTND3P17-201ENST00000416968 344 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.42□□□□□ -2.34
CD40LGP29965 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.42□□□□□ -2.34
CD40LGP29965 AC004854.1-201ENST00000440356 349 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.42□□□□□ -2.34
CD40LGP29965 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.42□□□□□ -2.34
CD40LGP29965 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.42□□□□□ -2.34
CD40LGP29965 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.42□□□□□ -2.34
CD40LGP29965 AC069113.1-201ENST00000517763 267 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.42□□□□□ -2.34
CD40LGP29965 DEFB108E-201ENST00000524692 240 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 AC004584.2-201ENST00000570407 410 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 PRELID3BP2-201ENST00000605362 201 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 ELL2P3-201ENST00000457883 1602 ntBASIC0.42□□□□□ -2.34
CD40LGP29965 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
CD40LGP29965 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
CD40LGP29965 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
CD40LGP29965 RNU6-1097P-201ENST00000363586 107 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 RNU6-1240P-201ENST00000365155 104 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 RNU6-1335P-201ENST00000365426 107 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 RNU6-108P-201ENST00000365558 107 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 SNORD116-13-201ENST00000384408 92 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 SNORA75.2-201ENST00000391138 150 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 SNORA75.3-201ENST00000391231 150 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 RNU6-1186P-201ENST00000410429 97 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 RNA5SP494-201ENST00000410653 129 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 MTCO2P34-201ENST00000421994 607 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 MTCO2P3-201ENST00000442543 421 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 SNORA70.12-201ENST00000516084 153 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 RNU7-128P-201ENST00000517247 62 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.41□□□□□ -2.34
CD40LGP29965 MIR548AB-201ENST00000584917 84 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 BNIP3P39-201ENST00000601077 554 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 AL022161.1-201ENST00000604390 213 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 uc_338.11-201ENST00000619132 160 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 snoZ196.1-201ENST00000625269 89 ntBASIC0.41□□□□□ -2.34
CD40LGP29965 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.41□□□□□ -2.34
CD40LGP29965 AP000568.1-201ENST00000282964 442 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RNU4-48P-201ENST00000365559 182 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RNU6-945P-201ENST00000383947 107 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 Y_RNA.399-201ENST00000383955 105 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 SNORA67.2-201ENST00000384300 149 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RPS26P42-201ENST00000413485 326 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RPS29P27-201ENST00000463711 170 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 AL049830.1-201ENST00000468034 425 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.4□□□□□ -2.35
CD40LGP29965 AC010493.1-201ENST00000513479 292 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RNU6-917P-201ENST00000516294 104 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RNU6-612P-201ENST00000516909 102 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 AP003461.1-201ENST00000528866 78 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
CD40LGP29965 AC068790.2-201ENST00000602601 557 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 AC068792.1-201ENST00000621354 417 ntBASIC0.4□□□□□ -2.35
CD40LGP29965 RNY1P14-201ENST00000384426 108 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 SNORD73A-201ENST00000386062 65 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.39□□□□□ -2.35
CD40LGP29965 AC008134.1-201ENST00000420943 193 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.39□□□□□ -2.35
CD40LGP29965 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.39□□□□□ -2.35
CD40LGP29965 RPL31P35-201ENST00000431058 377 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.39□□□□□ -2.35
CD40LGP29965 AC009961.2-201ENST00000435771 251 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.39□□□□□ -2.35
CD40LGP29965 AC022364.2-201ENST00000457963 554 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 RNU6-221P-201ENST00000459541 99 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 AC025627.3-201ENST00000582078 182 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 MIR98-201ENST00000606724 119 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 AL078596.1-201ENST00000624856 447 ntBASIC0.39□□□□□ -2.35
CD40LGP29965 RNU6-227P-201ENST00000362865 103 ntBASIC0.38□□□□□ -2.35
CD40LGP29965 RNU6-163P-201ENST00000384396 106 ntBASIC0.38□□□□□ -2.35
CD40LGP29965 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.38□□□□□ -2.35
CD40LGP29965 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.38□□□□□ -2.35
CD40LGP29965 AC106883.1-201ENST00000418805 562 ntBASIC0.38□□□□□ -2.35
CD40LGP29965 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.38□□□□□ -2.35
CD40LGP29965 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms