Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC103996.1-201ENST00000555468 102 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 AC008751.2-201ENST00000597885 980 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 AP000811.1-201ENST00000603803 651 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 AC021506.2-201ENST00000612354 169 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.4□□□□□ -2.34
COL4A5P29400 Y_RNA.142-201ENST00000363491 102 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNU6-1097P-201ENST00000363586 107 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNU6-1240P-201ENST00000365155 104 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNU6-108P-201ENST00000365558 107 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
COL4A5P29400 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 MIR1-2-201ENST00000384961 85 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 SNORD12-201ENST00000391002 90 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 SNORA26.3-201ENST00000391119 136 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.4□□□□□ -2.35
COL4A5P29400 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.4□□□□□ -2.35
COL4A5P29400 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.4□□□□□ -2.35
COL4A5P29400 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.4□□□□□ -2.35
COL4A5P29400 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.4□□□□□ -2.35
COL4A5P29400 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.4□□□□□ -2.35
COL4A5P29400 RNU7-90P-201ENST00000459216 62 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNU7-57P-201ENST00000459540 60 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.4□□□□□ -2.35
COL4A5P29400 AC105417.1-201ENST00000514691 285 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNA5SP168-201ENST00000516642 112 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNU6-165P-201ENST00000517170 99 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 AP003461.1-201ENST00000528866 78 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 AC025627.3-201ENST00000582078 182 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 AL929325.1-201ENST00000603096 117 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 AL357312.1-201ENST00000603879 298 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 CTHRC1P1-201ENST00000605383 469 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.4□□□□□ -2.35
COL4A5P29400 AC068647.2-201ENST00000637380 353 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 MTND4P4-201ENST00000439033 1366 ntBASIC0.4□□□□□ -2.35
COL4A5P29400 RNU6-440P-201ENST00000390882 105 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 MTCO2P23-201ENST00000425216 680 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 AL606662.1-201ENST00000445763 553 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.39□□□□□ -2.35
COL4A5P29400 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.39□□□□□ -2.35
COL4A5P29400 RNU6-1037P-201ENST00000459571 107 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.39□□□□□ -2.35
COL4A5P29400 PDCD5P2-201ENST00000507570 312 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 SNORD79.1-201ENST00000516069 84 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 RNU6-410P-201ENST00000517006 107 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 AC004584.2-201ENST00000570407 410 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 AC022432.1-201ENST00000595739 310 ntBASIC0.39□□□□□ -2.35
COL4A5P29400 RNU1-76P-201ENST00000362903 159 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 RNU6-660P-201ENST00000364566 109 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 RNU5E-5P-201ENST00000365379 116 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 RNU6-550P-201ENST00000391057 101 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AL031577.2-201ENST00000404133 280 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC002429.1-201ENST00000437672 148 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 MTCO3P18-201ENST00000440206 761 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.38□□□□□ -2.35
COL4A5P29400 EPS15P1-201ENST00000448836 336 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC022616.3-201ENST00000523940 148 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.38□□□□□ -2.35
COL4A5P29400 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.38□□□□□ -2.35
COL4A5P29400 AP001836.1-201ENST00000604675 523 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC138749.5-201ENST00000611461 208 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC116165.2-201ENST00000616705 206 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC137590.2-201ENST00000619709 240 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AP002371.2-201ENST00000624450 503 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 AC010608.3-201ENST00000625048 527 ntBASIC0.38□□□□□ -2.35
COL4A5P29400 SNORA4.2-201ENST00000365313 147 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 RNU6-30P-201ENST00000384561 107 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MIR653-201ENST00000385279 96 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 SNORD70.1-201ENST00000391007 85 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 GPR143P-201ENST00000434155 205 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 FABP5P4-201ENST00000437203 171 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 HMGN2P34-201ENST00000437647 269 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AL033528.1-201ENST00000453780 140 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 SRRM1P2-201ENST00000464531 1192 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 GMFBP1-201ENST00000467831 427 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.37□□□□□ -2.35
COL4A5P29400 AL590705.4-201ENST00000532209 134 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 SNORA59B-202ENST00000578183 701 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AP000907.4-201ENST00000604143 237 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MIR8054-201ENST00000620877 86 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AL450472.1-202ENST00000637286 180 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 RNU4-12P-201ENST00000365233 139 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 RNU6-169P-201ENST00000365336 107 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 RNU4-48P-201ENST00000365559 182 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
COL4A5P29400 RNU6-1031P-201ENST00000384773 107 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MIR100-201ENST00000385259 80 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MIR454-201ENST00000390180 115 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.37□□□□□ -2.35
COL4A5P29400 NFU1P2-201ENST00000448700 469 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AC016717.1-201ENST00000448918 286 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AL031274.1-201ENST00000450334 232 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 C1DP4-201ENST00000455429 424 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 LINC01399-202ENST00000458450 244 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 SCARNA18-201ENST00000459004 134 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.37□□□□□ -2.35
COL4A5P29400 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.37□□□□□ -2.35
COL4A5P29400 RNA5SP255-201ENST00000516370 107 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AC090049.2-201ENST00000550377 109 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AC018659.1-201ENST00000551083 169 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms