Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.533-201ENST00000384596 114 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RNU2-41P-201ENST00000410991 178 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AC004866.1-201ENST00000411748 78 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RPL21P111-201ENST00000418453 477 ntBASIC1.68□□□□□ -2.14
RPA1P27694 EBAG9P1-201ENST00000418955 543 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AL445305.1-201ENST00000432577 575 ntBASIC1.68□□□□□ -2.14
RPA1P27694 HMGB1P18-201ENST00000438801 619 ntBASIC1.68□□□□□ -2.14
RPA1P27694 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.68□□□□□ -2.14
RPA1P27694 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA1P27694 AC016925.1-201ENST00000458303 298 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RNU7-14P-201ENST00000459331 62 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RPS23P5-201ENST00000495419 428 ntBASIC1.68□□□□□ -2.14
RPA1P27694 MTCO1P29-201ENST00000496868 288 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA1P27694 AC114801.2-201ENST00000503825 781 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AC025465.3-201ENST00000510570 311 ntBASIC1.68□□□□□ -2.14
RPA1P27694 Y_RNA.670-201ENST00000516255 105 ntBASIC1.68□□□□□ -2.14
RPA1P27694 SUMO2P18-201ENST00000518873 252 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA1P27694 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.68□□□□□ -2.14
RPA1P27694 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA1P27694 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
RPA1P27694 POLR3GP2-201ENST00000588366 668 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AL645939.4-201ENST00000604495 135 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AC009994.1-201ENST00000606889 253 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AL355073.2-201ENST00000612106 557 ntBASIC1.68□□□□□ -2.14
RPA1P27694 AC022306.2-201ENST00000617563 647 ntBASIC1.68□□□□□ -2.14
RPA1P27694 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPA1P27694 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPA1P27694 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPA1P27694 Y_RNA.88-201ENST00000363029 99 ntBASIC1.67□□□□□ -2.14
RPA1P27694 RNU4-13P-201ENST00000364019 141 ntBASIC1.67□□□□□ -2.14
RPA1P27694 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
RPA1P27694 Y_RNA.474-201ENST00000384341 102 ntBASIC1.67□□□□□ -2.14
RPA1P27694 RNU6-1026P-201ENST00000384465 108 ntBASIC1.67□□□□□ -2.14
RPA1P27694 SNORA12.2-201ENST00000391040 156 ntBASIC1.67□□□□□ -2.14
RPA1P27694 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
RPA1P27694 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
RPA1P27694 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPA1P27694 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA1P27694 MTCO1P44-201ENST00000441935 243 ntBASIC1.67□□□□□ -2.14
RPA1P27694 AC087477.1-201ENST00000465747 340 ntBASIC1.67□□□□□ -2.14
RPA1P27694 ATP5EP1-201ENST00000510257 156 ntBASIC1.67□□□□□ -2.14
RPA1P27694 AC026782.1-201ENST00000512952 449 ntBASIC1.67□□□□□ -2.14
RPA1P27694 RNA5SP384-201ENST00000516615 116 ntBASIC1.67□□□□□ -2.14
RPA1P27694 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.67□□□□□ -2.14
RPA1P27694 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
RPA1P27694 AC005730.3-201ENST00000583067 366 ntBASIC1.67□□□□□ -2.14
RPA1P27694 MIR8076-201ENST00000611401 83 ntBASIC1.67□□□□□ -2.14
RPA1P27694 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.67□□□□□ -2.14
RPA1P27694 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA1P27694 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPA1P27694 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPA1P27694 SNORA72.1-201ENST00000363485 129 ntBASIC1.66□□□□□ -2.14
RPA1P27694 RNA5SP99-201ENST00000364020 114 ntBASIC1.66□□□□□ -2.14
RPA1P27694 RNU6-128P-201ENST00000383976 107 ntBASIC1.66□□□□□ -2.14
RPA1P27694 U8.10-201ENST00000384260 133 ntBASIC1.66□□□□□ -2.14
RPA1P27694 RNU6-790P-201ENST00000384479 105 ntBASIC1.66□□□□□ -2.14
RPA1P27694 RNU6-482P-201ENST00000391068 107 ntBASIC1.66□□□□□ -2.14
RPA1P27694 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RPA1P27694 MIR208B-201ENST00000401172 77 ntBASIC1.66□□□□□ -2.14
RPA1P27694 FTH1P12-201ENST00000432137 551 ntBASIC1.66□□□□□ -2.14
RPA1P27694 SNRPEP8-201ENST00000442866 260 ntBASIC1.66□□□□□ -2.14
RPA1P27694 PCMTD1P1-201ENST00000455560 355 ntBASIC1.66□□□□□ -2.14
RPA1P27694 TOMM22P6-201ENST00000465035 409 ntBASIC1.66□□□□□ -2.14
RPA1P27694 RPL7P42-201ENST00000481005 679 ntBASIC1.66□□□□□ -2.14
RPA1P27694 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
RPA1P27694 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA1P27694 AC093913.1-201ENST00000614178 329 ntBASIC1.66□□□□□ -2.14
RPA1P27694 Y_RNA.72-201ENST00000362894 103 ntBASIC1.65□□□□□ -2.15
RPA1P27694 RNU6-784P-201ENST00000384330 106 ntBASIC1.65□□□□□ -2.15
RPA1P27694 RNU6-331P-201ENST00000384724 107 ntBASIC1.65□□□□□ -2.15
RPA1P27694 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
RPA1P27694 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RPA1P27694 MIR300-201ENST00000401138 83 ntBASIC1.65□□□□□ -2.15
RPA1P27694 AC009161.1-201ENST00000417306 376 ntBASIC1.65□□□□□ -2.15
RPA1P27694 AC139712.2-201ENST00000424302 339 ntBASIC1.65□□□□□ -2.15
RPA1P27694 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.65□□□□□ -2.15
RPA1P27694 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.65□□□□□ -2.15
RPA1P27694 MTND3P10-201ENST00000450967 341 ntBASIC1.65□□□□□ -2.15
RPA1P27694 U8.21-201ENST00000459536 136 ntBASIC1.65□□□□□ -2.15
RPA1P27694 RPL30P10-201ENST00000488148 337 ntBASIC1.65□□□□□ -2.15
RPA1P27694 RPL23AP75-201ENST00000491601 451 ntBASIC1.65□□□□□ -2.15
RPA1P27694 HMGN1P13-201ENST00000505795 138 ntBASIC1.65□□□□□ -2.15
RPA1P27694 AC097473.1-201ENST00000508142 408 ntBASIC1.65□□□□□ -2.15
RPA1P27694 RNU6-1098P-201ENST00000516772 96 ntBASIC1.65□□□□□ -2.15
RPA1P27694 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.65□□□□□ -2.15
RPA1P27694 CBX3P8-201ENST00000532412 525 ntBASIC1.65□□□□□ -2.15
RPA1P27694 AL121579.1-201ENST00000555129 305 ntBASIC1.65□□□□□ -2.15
RPA1P27694 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.65□□□□□ -2.15
RPA1P27694 AC019193.3-201ENST00000609144 554 ntBASIC1.65□□□□□ -2.15
RPA1P27694 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RPA1P27694 ZNF72P-201ENST00000425869 1908 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU6-874P-201ENST00000362390 105 ntBASIC1.64□□□□□ -2.15
RPA1P27694 Y_RNA.132-201ENST00000363421 102 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU6-112P-201ENST00000363599 104 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU4-42P-201ENST00000364738 142 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU6-510P-201ENST00000391239 108 ntBASIC1.64□□□□□ -2.15
RPA1P27694 Y_RNA.594-201ENST00000410373 140 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU6-174P-201ENST00000410406 106 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms