Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.13□□□□□ -1.91
VAMP1P23763 FAM25E-202ENST00000608562 189 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 MIR6780A-201ENST00000615089 68 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 MIR338-201ENST00000636369 67 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAMP1P23763 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAMP1P23763 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.13□□□□□ -1.91
VAMP1P23763 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VAMP1P23763 AC134026.1-201ENST00000623249 2239 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.12□□□□□ -1.91
VAMP1P23763 MIR383-201ENST00000362257 73 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 RNU6-862P-201ENST00000362804 105 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.82-201ENST00000363000 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.92-201ENST00000363043 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.122-201ENST00000363331 96 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 RNU1-22P-201ENST00000363334 158 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.217-201ENST00000364214 105 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.235-201ENST00000364412 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.306-201ENST00000365015 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.312-201ENST00000365089 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.322-201ENST00000365151 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 RNU6-211P-201ENST00000384047 107 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 SNORA72.4-201ENST00000384174 132 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 SNORA8-201ENST00000384574 139 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 RNU6-763P-201ENST00000390865 106 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 AC018634.1-201ENST00000437554 401 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.650-201ENST00000459002 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.641-201ENST00000459414 105 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.777-201ENST00000516982 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 MIR5194-201ENST00000582634 120 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 AC005786.1-201ENST00000588553 154 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.771-201ENST00000598668 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 AC005972.2-201ENST00000604690 348 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 AL353149.1-201ENST00000610667 244 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 Y_RNA.789-201ENST00000622480 102 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 AC011944.2-201ENST00000624440 683 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VAMP1P23763 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
VAMP1P23763 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.12□□□□□ -1.91
VAMP1P23763 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.12□□□□□ -1.91
VAMP1P23763 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VAMP1P23763 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.11□□□□□ -1.91
VAMP1P23763 Y_RNA.199-201ENST00000364014 102 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 Y_RNA.200-201ENST00000364018 102 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 Y_RNA.292-201ENST00000364904 97 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 Y_RNA.310-201ENST00000365063 113 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 RNU1-52P-201ENST00000384190 164 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 MIR550A3-201ENST00000390735 95 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 RNA5SP465-201ENST00000391195 109 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 RNA5SP467-201ENST00000391274 118 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 MIR1298-201ENST00000408783 112 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 CST2P1-201ENST00000425770 87 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 snoU13.1-201ENST00000459157 104 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 AC106707.2-201ENST00000484182 374 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
VAMP1P23763 SNORA70.19-201ENST00000516717 90 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 MIR4643-201ENST00000577473 78 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 MIR3169-201ENST00000578032 83 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 AC073413.2-201ENST00000604332 360 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 AC091953.3-201ENST00000623220 236 ntBASIC3.11□□□□□ -1.91
VAMP1P23763 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP1P23763 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VAMP1P23763 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP1P23763 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VAMP1P23763 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VAMP1P23763 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VAMP1P23763 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VAMP1P23763 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VAMP1P23763 SNORD9-201ENST00000362566 104 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 RNU6-1205P-201ENST00000363625 106 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 MIR518A2-201ENST00000384966 87 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 SNORA48.5-201ENST00000391143 135 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 Y_RNA.621-201ENST00000411065 96 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 NDUFB1P1-201ENST00000435191 180 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.1□□□□□ -1.91
VAMP1P23763 RNU7-116P-201ENST00000516940 62 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.1□□□□□ -1.91
VAMP1P23763 LARP7P3-201ENST00000579888 337 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.1□□□□□ -1.91
VAMP1P23763 AL078604.3-201ENST00000615580 211 ntBASIC3.1□□□□□ -1.91
VAMP1P23763 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VAMP1P23763 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
VAMP1P23763 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VAMP1P23763 Y_RNA.83-201ENST00000363005 113 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 RNA5SP447-201ENST00000363749 119 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 RNU6-1048P-201ENST00000364054 107 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 RNA5SP97-201ENST00000365006 84 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 RNA5SP366-201ENST00000365454 123 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 SNORD116-13-201ENST00000384408 92 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 MIR597-201ENST00000384968 97 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 RNA5SP293-201ENST00000410527 113 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.09□□□□□ -1.91
VAMP1P23763 EBAG9P1-201ENST00000418955 543 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
VAMP1P23763 AC117454.1-201ENST00000491120 168 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms