Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR586-201ENST00000385035 97 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 HMGN2P18-201ENST00000450680 270 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 AC008885.1-201ENST00000514930 301 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 RNU6-991P-201ENST00000516168 107 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 SNORA48.11-201ENST00000517015 89 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 AP002001.1-203ENST00000534002 267 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 AC018630.3-201ENST00000542637 96 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 MIR4423-201ENST00000580922 80 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 MIR4513-201ENST00000581077 86 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 UBL5P2-201ENST00000583788 219 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 AC022441.3-201ENST00000605737 136 ntBASIC3.69□□□□□ -1.82
ERCC3P19447 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
ERCC3P19447 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ERCC3P19447 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ERCC3P19447 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
ERCC3P19447 MIR148B-201ENST00000362252 99 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 Y_RNA.383-201ENST00000383855 97 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 RN7SKP123-201ENST00000410732 291 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 AC092427.1-202ENST00000430569 476 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 RNU7-57P-201ENST00000459540 60 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 CENPBD1P1-201ENST00000464061 469 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 HMGN2P9-201ENST00000476875 229 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.68□□□□□ -1.82
ERCC3P19447 AC093732.2-201ENST00000607950 274 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 AC013412.1-201ENST00000610687 192 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ERCC3P19447 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 AC245060.5-201ENST00000610778 3293 ntBASIC3.68□□□□□ -1.82
ERCC3P19447 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC3P19447 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.67□□□□□ -1.82
ERCC3P19447 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC3P19447 SNORA25.1-201ENST00000362326 128 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 SNORD31B-201ENST00000364977 69 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 SNORA7.4-201ENST00000384249 137 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 SNORA67.2-201ENST00000384300 149 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 RNA5SP229-201ENST00000410809 99 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 TOMM22P2-201ENST00000430735 237 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 AC025750.2-201ENST00000442609 450 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 AC104389.3-201ENST00000445629 235 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 MRPS10P1-201ENST00000448483 130 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 AC016717.1-201ENST00000448918 286 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 RNU2-31P-201ENST00000516954 155 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 RNU6-388P-201ENST00000517012 105 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 RNU6-389P-201ENST00000517048 105 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.67□□□□□ -1.82
ERCC3P19447 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.67□□□□□ -1.82
ERCC3P19447 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 AL137790.1-201ENST00000634283 177 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 AC008264.2-201ENST00000610193 3731 ntBASIC3.67□□□□□ -1.82
ERCC3P19447 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC3P19447 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC3P19447 MIR548H3-201ENST00000408771 118 ntBASIC3.66□□□□□ -1.82
ERCC3P19447 MTND4LP30-201ENST00000454092 297 ntBASIC3.66□□□□□ -1.82
ERCC3P19447 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.66□□□□□ -1.82
ERCC3P19447 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
ERCC3P19447 RN7SKP40-201ENST00000517211 242 ntBASIC3.66□□□□□ -1.82
ERCC3P19447 AC008873.1-201ENST00000625051 138 ntBASIC3.66□□□□□ -1.82
ERCC3P19447 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ERCC3P19447 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
ERCC3P19447 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.66□□□□□ -1.82
ERCC3P19447 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC3P19447 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC3P19447 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.65□□□□□ -1.82
ERCC3P19447 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERCC3P19447 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERCC3P19447 Y_RNA.60-201ENST00000362831 98 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 RNU6-379P-201ENST00000363813 104 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 RNU6-418P-201ENST00000384035 107 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 MIR95-201ENST00000385072 81 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 MT-TG-201ENST00000387429 68 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 RNU2-54P-201ENST00000410299 190 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 RNU6-57P-201ENST00000411348 103 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 RPL19P1-201ENST00000411635 428 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ERCC3P19447 AC003685.2-201ENST00000422795 395 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 AC107083.1-201ENST00000439643 279 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 SERF1AP1-201ENST00000514575 187 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 Y_RNA.680-201ENST00000516441 93 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 RNU6-667P-201ENST00000517186 102 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.65□□□□□ -1.83
ERCC3P19447 MIR3145-201ENST00000580727 82 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 MIR7106-201ENST00000612419 65 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 AL449363.1-201ENST00000617815 186 ntBASIC3.65□□□□□ -1.83
ERCC3P19447 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.65□□□□□ -1.83
ERCC3P19447 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ERCC3P19447 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ERCC3P19447 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERCC3P19447 AC009963.1-201ENST00000417265 157 ntBASIC3.64□□□□□ -1.83
ERCC3P19447 AC005357.1-201ENST00000588399 301 ntBASIC3.64□□□□□ -1.83
ERCC3P19447 AC010900.2-201ENST00000604508 210 ntBASIC3.64□□□□□ -1.83
ERCC3P19447 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.64□□□□□ -1.83
ERCC3P19447 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
ERCC3P19447 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.64□□□□□ -1.83
ERCC3P19447 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.63□□□□□ -1.83
ERCC3P19447 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ERCC3P19447 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ERCC3P19447 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ERCC3P19447 MIR335-201ENST00000362173 94 ntBASIC3.63□□□□□ -1.83
ERCC3P19447 RNU6-454P-201ENST00000364292 107 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms