Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
NID1P14543 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.63□□□□□ -1.83
NID1P14543 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.63□□□□□ -1.83
NID1P14543 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NID1P14543 SNORD46.1-201ENST00000364139 104 ntBASIC3.63□□□□□ -1.83
NID1P14543 MIR570-201ENST00000384917 97 ntBASIC3.63□□□□□ -1.83
NID1P14543 AC023141.4-201ENST00000412031 328 ntBASIC3.63□□□□□ -1.83
NID1P14543 AF228730.3-201ENST00000436691 102 ntBASIC3.63□□□□□ -1.83
NID1P14543 SNORD65B-201ENST00000459126 73 ntBASIC3.63□□□□□ -1.83
NID1P14543 RNU7-57P-201ENST00000459540 60 ntBASIC3.63□□□□□ -1.83
NID1P14543 AC080013.2-201ENST00000460866 323 ntBASIC3.63□□□□□ -1.83
NID1P14543 RNU5F-4P-201ENST00000516581 114 ntBASIC3.63□□□□□ -1.83
NID1P14543 RNU6-126P-201ENST00000516685 103 ntBASIC3.63□□□□□ -1.83
NID1P14543 RPL23AP91-201ENST00000569211 455 ntBASIC3.63□□□□□ -1.83
NID1P14543 MIR3609-201ENST00000582661 80 ntBASIC3.63□□□□□ -1.83
NID1P14543 RNU1-30P-201ENST00000606575 163 ntBASIC3.63□□□□□ -1.83
NID1P14543 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.63□□□□□ -1.83
NID1P14543 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
NID1P14543 AC103988.1-201ENST00000566382 2177 ntBASIC3.63□□□□□ -1.83
NID1P14543 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NID1P14543 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NID1P14543 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
NID1P14543 MAPK10-372ENST00000641954 3413 ntBASIC3.63□□□□□ -1.83
NID1P14543 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NID1P14543 SNORA51.10-201ENST00000384418 136 ntBASIC3.62□□□□□ -1.83
NID1P14543 RNU1-57P-201ENST00000384491 166 ntBASIC3.62□□□□□ -1.83
NID1P14543 MIR181A2-201ENST00000384863 110 ntBASIC3.62□□□□□ -1.83
NID1P14543 AC245291.1-201ENST00000419501 328 ntBASIC3.62□□□□□ -1.83
NID1P14543 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NID1P14543 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
NID1P14543 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.62□□□□□ -1.83
NID1P14543 RNU6-970P-201ENST00000516312 107 ntBASIC3.62□□□□□ -1.83
NID1P14543 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.62□□□□□ -1.83
NID1P14543 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NID1P14543 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NID1P14543 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NID1P14543 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.62□□□□□ -1.83
NID1P14543 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NID1P14543 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NID1P14543 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.61□□□□□ -1.83
NID1P14543 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NID1P14543 RNU6-1113P-201ENST00000384348 107 ntBASIC3.61□□□□□ -1.83
NID1P14543 RNU6-1275P-201ENST00000391087 107 ntBASIC3.61□□□□□ -1.83
NID1P14543 RNA5SP136-201ENST00000410906 107 ntBASIC3.61□□□□□ -1.83
NID1P14543 snoU13.28-201ENST00000459235 104 ntBASIC3.61□□□□□ -1.83
NID1P14543 RNA5SP179-201ENST00000517284 121 ntBASIC3.61□□□□□ -1.83
NID1P14543 AC025647.1-201ENST00000517879 253 ntBASIC3.61□□□□□ -1.83
NID1P14543 AC107934.2-201ENST00000518653 310 ntBASIC3.61□□□□□ -1.83
NID1P14543 AC027419.1-201ENST00000522976 328 ntBASIC3.61□□□□□ -1.83
NID1P14543 AL360157.1-201ENST00000565962 87 ntBASIC3.61□□□□□ -1.83
NID1P14543 AL365205.2-201ENST00000594586 68 ntBASIC3.61□□□□□ -1.83
NID1P14543 AL929325.1-201ENST00000603096 117 ntBASIC3.61□□□□□ -1.83
NID1P14543 HSPE1P7-201ENST00000604681 321 ntBASIC3.61□□□□□ -1.83
NID1P14543 AC091167.4-201ENST00000605079 184 ntBASIC3.61□□□□□ -1.83
NID1P14543 MIR6075-201ENST00000620782 95 ntBASIC3.61□□□□□ -1.83
NID1P14543 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
NID1P14543 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NID1P14543 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.61□□□□□ -1.83
NID1P14543 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NID1P14543 AL136360.1-201ENST00000503377 1900 ntBASIC3.6□□□□□ -1.83
NID1P14543 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NID1P14543 SNORA31-201ENST00000362607 130 ntBASIC3.6□□□□□ -1.83
NID1P14543 Y_RNA.111-201ENST00000363248 100 ntBASIC3.6□□□□□ -1.83
NID1P14543 Y_RNA.203-201ENST00000364106 102 ntBASIC3.6□□□□□ -1.83
NID1P14543 SNORD14D-201ENST00000384390 87 ntBASIC3.6□□□□□ -1.83
NID1P14543 Y_RNA.544-201ENST00000384650 113 ntBASIC3.6□□□□□ -1.83
NID1P14543 MIR300-201ENST00000401138 83 ntBASIC3.6□□□□□ -1.83
NID1P14543 MIR1283-1-201ENST00000408494 87 ntBASIC3.6□□□□□ -1.83
NID1P14543 RNU6ATAC-201ENST00000408749 126 ntBASIC3.6□□□□□ -1.83
NID1P14543 RNA5SP511-201ENST00000410487 115 ntBASIC3.6□□□□□ -1.83
NID1P14543 CALM2P4-201ENST00000430810 426 ntBASIC3.6□□□□□ -1.83
NID1P14543 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.6□□□□□ -1.83
NID1P14543 RNA5SP310-201ENST00000459084 116 ntBASIC3.6□□□□□ -1.83
NID1P14543 AC010531.2-201ENST00000465012 153 ntBASIC3.6□□□□□ -1.83
NID1P14543 RNA5SP281-201ENST00000516504 135 ntBASIC3.6□□□□□ -1.83
NID1P14543 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
NID1P14543 RNU6-1098P-201ENST00000516772 96 ntBASIC3.6□□□□□ -1.83
NID1P14543 RN7SKP289-201ENST00000517244 295 ntBASIC3.6□□□□□ -1.83
NID1P14543 AC015720.1-201ENST00000565251 277 ntBASIC3.6□□□□□ -1.83
NID1P14543 MIR4662B-201ENST00000579498 81 ntBASIC3.6□□□□□ -1.83
NID1P14543 MIR3690-201ENST00000580266 75 ntBASIC3.6□□□□□ -1.83
NID1P14543 MIR4753-201ENST00000585119 83 ntBASIC3.6□□□□□ -1.83
NID1P14543 MIR486-1-201ENST00000612171 68 ntBASIC3.6□□□□□ -1.83
NID1P14543 Pinc.1-201ENST00000616452 154 ntBASIC3.6□□□□□ -1.83
NID1P14543 CR392039.5-201ENST00000623201 510 ntBASIC3.6□□□□□ -1.83
NID1P14543 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.6□□□□□ -1.83
NID1P14543 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.6□□□□□ -1.83
NID1P14543 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NID1P14543 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.6□□□□□ -1.83
NID1P14543 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
NID1P14543 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NID1P14543 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NID1P14543 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NID1P14543 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.59□□□□□ -1.83
NID1P14543 Y_RNA.49-201ENST00000362714 112 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms