| CD99 | P14209 | CASC19-280 | ENST00000642102 | 1351 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| CD99 | P14209 | ICE2P2-201 | ENST00000483823 | 2787 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| CD99 | P14209 | MT-ND1-201 | ENST00000361390 | 956 nt | APPRIS P1 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR302D-201 | ENST00000362275 | 68 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.100-201 | ENST00000363141 | 102 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-266P-201 | ENST00000364225 | 107 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.231-201 | ENST00000364358 | 102 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.373-201 | ENST00000365600 | 103 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-393P-201 | ENST00000384475 | 107 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | MT-TL1-201 | ENST00000386347 | 75 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | PIGP-205 | ENST00000399103 | 656 nt | APPRIS P1 TSL 1 (best) BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL356776.1-201 | ENST00000406574 | 447 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC007314.1-201 | ENST00000414538 | 565 nt | TSL 4 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL669831.2-201 | ENST00000422528 | 456 nt | TSL 5 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | TRAPPC2P8-201 | ENST00000440676 | 396 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC069542.1-201 | ENST00000445235 | 557 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC015983.2-201 | ENST00000446053 | 472 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL591504.1-201 | ENST00000450681 | 414 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL160162.1-201 | ENST00000456715 | 442 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | RPL31P58-201 | ENST00000469001 | 379 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC010420.1-201 | ENST00000515077 | 509 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-120P-201 | ENST00000516077 | 103 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-358P-201 | ENST00000516564 | 75 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC087854.1-201 | ENST00000519706 | 414 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC104576.1-201 | ENST00000524225 | 88 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL139193.1-201 | ENST00000554967 | 539 nt | TSL 4 BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC005668.1-201 | ENST00000571142 | 476 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR548AC-201 | ENST00000585049 | 88 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL162413.1-201 | ENST00000603198 | 110 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC092747.3-201 | ENST00000603769 | 301 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AP000654.2-201 | ENST00000605633 | 586 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | HOTAIRM1_5.1-201 | ENST00000619311 | 145 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | RMST_7.1-201 | ENST00000621935 | 268 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC068205.3-201 | ENST00000636385 | 468 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC099654.5-201 | ENST00000636479 | 350 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR6767-201 | ENST00000637302 | 66 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.9-201 | ENST00000362354 | 101 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-1059P-201 | ENST00000363752 | 98 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL354864.1-201 | ENST00000373226 | 539 nt | TSL 2 BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR193B-201 | ENST00000384907 | 83 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR487A-201 | ENST00000385009 | 80 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL606923.1-201 | ENST00000406616 | 190 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL357139.1-201 | ENST00000407792 | 426 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU2-29P-201 | ENST00000410423 | 189 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL135790.2-201 | ENST00000437701 | 267 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MTATP6P23-201 | ENST00000440153 | 476 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MTCO3P18-201 | ENST00000440206 | 761 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MTND1P11-201 | ENST00000456661 | 876 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU7-187P-201 | ENST00000458985 | 68 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-1208P-201 | ENST00000459588 | 107 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC004223.1-201 | ENST00000479840 | 271 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | TRBVA-201 | ENST00000498804 | 316 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | HMGN1P12-201 | ENST00000499125 | 195 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC018710.1-201 | ENST00000506509 | 158 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC105417.1-201 | ENST00000514691 | 285 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU4-49P-201 | ENST00000516080 | 140 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-1069P-201 | ENST00000516612 | 133 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-1314P-201 | ENST00000517139 | 104 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MTND4P7-201 | ENST00000523876 | 130 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AP003174.2-201 | ENST00000544663 | 294 nt | TSL 3 BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RRN3P3-201 | ENST00000549207 | 578 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | HSPE1P4-201 | ENST00000550617 | 308 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC103996.1-201 | ENST00000555468 | 102 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR4801-201 | ENST00000582704 | 82 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC091135.1-201 | ENST00000585943 | 307 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC060780.3-201 | ENST00000589464 | 80 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC009994.1-201 | ENST00000606889 | 253 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL355073.2-201 | ENST00000612106 | 557 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL359547.2-201 | ENST00000615810 | 418 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | RMST_4.1-201 | ENST00000616886 | 107 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | U4.5-201 | ENST00000617137 | 123 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL121890.5-201 | ENST00000620848 | 304 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC006504.8-201 | ENST00000621046 | 635 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC022418.1-201 | ENST00000624118 | 445 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | U6.114-201 | ENST00000636407 | 96 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | IL6ST-203 | ENST00000381287 | 8667 nt | TSL 5 BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | C1orf141-205 | ENST00000475209 | 2079 nt | APPRIS ALT2 TSL 5 BASIC | 1.06 | □□□□□ -2.24 | | |
| CD99 | P14209 | CYLC2-204 | ENST00000612124 | 1817 nt | APPRIS P1 TSL 1 (best) BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | LINC02555-201 | ENST00000563933 | 1951 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | CEP290-201 | ENST00000309041 | 7616 nt | APPRIS ALT1 TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-254P-201 | ENST00000363377 | 107 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNA5SP457-201 | ENST00000363657 | 124 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.279-201 | ENST00000364763 | 95 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.301-201 | ENST00000364990 | 103 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.324-201 | ENST00000365165 | 102 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | Y_RNA.394-201 | ENST00000383942 | 103 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | SNORA32.2-201 | ENST00000384049 | 122 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-692P-201 | ENST00000384496 | 107 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | RNU4-46P-201 | ENST00000410818 | 138 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC138393.2-201 | ENST00000414742 | 246 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | EBAG9P1-201 | ENST00000418955 | 543 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | LINC02263-203 | ENST00000426240 | 515 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL355314.2-201 | ENST00000427182 | 436 nt | TSL 3 BASIC | 1.05 | □□□□□ -2.24 | | |