Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL6A2P12110 Y_RNA.464-201ENST00000384282 110 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 SNORA12-201ENST00000391162 147 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
COL6A2P12110 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.14□□□□□ -1.91
COL6A2P12110 RN7SL293P-201ENST00000481765 281 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 AC107393.1-201ENST00000512403 346 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
COL6A2P12110 DEFB117-201ENST00000602356 141 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
COL6A2P12110 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL6A2P12110 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.13□□□□□ -1.91
COL6A2P12110 Y_RNA.243-201ENST00000364481 109 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 Y_RNA.329-201ENST00000365209 107 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL6A2P12110 MIR490-201ENST00000384865 128 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 MIR586-201ENST00000385035 97 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AL139281.1-201ENST00000422120 335 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
COL6A2P12110 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.13□□□□□ -1.91
COL6A2P12110 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AP005660.1-201ENST00000522972 293 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 MIR3145-201ENST00000580727 82 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.13□□□□□ -1.91
COL6A2P12110 AC072026.1-201ENST00000605023 201 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 AC005828.6-201ENST00000606610 232 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 MAPK10-266ENST00000641066 6555 ntBASIC3.13□□□□□ -1.91
COL6A2P12110 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL6A2P12110 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
COL6A2P12110 AC010329.5-201ENST00000623497 2174 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
COL6A2P12110 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL6A2P12110 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
COL6A2P12110 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL6A2P12110 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL6A2P12110 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL6A2P12110 MIR183-201ENST00000384958 110 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 Y_RNA.597-201ENST00000410463 100 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 AC024067.1-201ENST00000426199 223 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.12□□□□□ -1.91
COL6A2P12110 CYCSP35-201ENST00000451978 304 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.12□□□□□ -1.91
COL6A2P12110 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.12□□□□□ -1.91
COL6A2P12110 RNU1-117P-201ENST00000517041 158 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.12□□□□□ -1.91
COL6A2P12110 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
COL6A2P12110 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.12□□□□□ -1.91
COL6A2P12110 snoU18.1-201ENST00000629629 71 ntBASIC3.12□□□□□ -1.91
COL6A2P12110 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL6A2P12110 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.12□□□□□ -1.91
COL6A2P12110 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
COL6A2P12110 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
COL6A2P12110 RNU1-72P-201ENST00000362976 153 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 RNU6-1020P-201ENST00000363684 107 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 RNU6-682P-201ENST00000363843 106 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 SNORD115-30-201ENST00000364117 82 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 Y_RNA.304-201ENST00000365011 112 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 Y_RNA.361-201ENST00000365515 120 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 MIR634-201ENST00000385208 97 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 RNA5SP344-201ENST00000411081 104 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
COL6A2P12110 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 RAC1P5-201ENST00000512182 576 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 RNU6-1212P-201ENST00000517023 104 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
COL6A2P12110 MIR4298-201ENST00000584380 73 ntBASIC3.11□□□□□ -1.91
COL6A2P12110 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.11□□□□□ -1.91
COL6A2P12110 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
COL6A2P12110 AC131280.1-202ENST00000624067 4211 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.1□□□□□ -1.91
COL6A2P12110 RNU6-1272P-201ENST00000362776 107 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNU6-47P-201ENST00000383866 107 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNU6-211P-201ENST00000384047 107 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 Y_RNA.435-201ENST00000384095 112 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 MIR548B-201ENST00000385247 97 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNU6-918P-201ENST00000391219 106 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 MIR548M-201ENST00000408260 86 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 MIR1294-201ENST00000408503 142 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 U6atac.2-201ENST00000408644 118 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNA5SP274-201ENST00000410484 108 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 COX6CP10-201ENST00000416832 224 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.1□□□□□ -1.91
COL6A2P12110 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNA5SP76-201ENST00000516277 87 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNU6-1098P-201ENST00000516772 96 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 RNU6-56P-201ENST00000516986 93 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
COL6A2P12110 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms