Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MTATP6P17-201ENST00000431030 672 ntBASIC0.98□□□□□ -2.25
CD28P10747 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.98□□□□□ -2.25
CD28P10747 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.98□□□□□ -2.25
CD28P10747 NFU1P2-201ENST00000448700 469 ntBASIC0.98□□□□□ -2.25
CD28P10747 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.98□□□□□ -2.25
CD28P10747 MTCO3P8-201ENST00000453691 755 ntBASIC0.98□□□□□ -2.25
CD28P10747 SRRM1P2-201ENST00000464531 1192 ntBASIC0.98□□□□□ -2.25
CD28P10747 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.98□□□□□ -2.25
CD28P10747 Y_RNA.693-201ENST00000516641 110 ntBASIC0.98□□□□□ -2.25
CD28P10747 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.98□□□□□ -2.25
CD28P10747 RRN3P3-201ENST00000549207 578 ntBASIC0.98□□□□□ -2.25
CD28P10747 AC005668.1-201ENST00000571142 476 ntBASIC0.98□□□□□ -2.25
CD28P10747 SNORA59B-202ENST00000578183 701 ntBASIC0.98□□□□□ -2.25
CD28P10747 MIR4742-201ENST00000581069 85 ntBASIC0.98□□□□□ -2.25
CD28P10747 MIR3611-201ENST00000584484 83 ntBASIC0.98□□□□□ -2.25
CD28P10747 RNU6-89P-201ENST00000606519 100 ntBASIC0.98□□□□□ -2.25
CD28P10747 AC104458.1-201ENST00000608243 463 ntBASIC0.98□□□□□ -2.25
CD28P10747 AL133215.3-201ENST00000609801 448 ntBASIC0.98□□□□□ -2.25
CD28P10747 RMST_3.1-201ENST00000611651 109 ntBASIC0.98□□□□□ -2.25
CD28P10747 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.98□□□□□ -2.25
CD28P10747 AC137590.2-201ENST00000619709 240 ntBASIC0.98□□□□□ -2.25
CD28P10747 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.98□□□□□ -2.25
CD28P10747 AC124864.2-201ENST00000624736 186 ntBASIC0.98□□□□□ -2.25
CD28P10747 SCARNA4-201ENST00000629045 128 ntBASIC0.98□□□□□ -2.25
CD28P10747 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
CD28P10747 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.97□□□□□ -2.25
CD28P10747 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
CD28P10747 SNORD33-201ENST00000362761 85 ntBASIC0.97□□□□□ -2.25
CD28P10747 RNU1-22P-201ENST00000363334 158 ntBASIC0.97□□□□□ -2.25
CD28P10747 RNU6-1085P-201ENST00000363576 107 ntBASIC0.97□□□□□ -2.25
CD28P10747 SNORD113-7-201ENST00000363762 77 ntBASIC0.97□□□□□ -2.25
CD28P10747 MIR518E-201ENST00000385252 88 ntBASIC0.97□□□□□ -2.25
CD28P10747 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CD28P10747 MIR450B-201ENST00000401182 78 ntBASIC0.97□□□□□ -2.25
CD28P10747 MRPS10P2-201ENST00000431226 381 ntBASIC0.97□□□□□ -2.25
CD28P10747 NDUFA5P4-201ENST00000436704 385 ntBASIC0.97□□□□□ -2.25
CD28P10747 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.97□□□□□ -2.25
CD28P10747 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.97□□□□□ -2.25
CD28P10747 AC079354.2-201ENST00000453523 154 ntBASIC0.97□□□□□ -2.25
CD28P10747 snoU13.27-201ENST00000459278 104 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC114982.1-201ENST00000469402 321 ntBASIC0.97□□□□□ -2.25
CD28P10747 COX6CP14-201ENST00000469580 174 ntBASIC0.97□□□□□ -2.25
CD28P10747 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.97□□□□□ -2.25
CD28P10747 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC019235.1-201ENST00000503847 207 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.97□□□□□ -2.25
CD28P10747 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
CD28P10747 RNU6-344P-201ENST00000516635 111 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.97□□□□□ -2.25
CD28P10747 MTND1P15-201ENST00000579262 949 ntBASIC0.97□□□□□ -2.25
CD28P10747 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
CD28P10747 MIR5006-201ENST00000583027 110 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC010620.1-201ENST00000601088 1102 ntBASIC0.97□□□□□ -2.25
CD28P10747 AP000907.4-201ENST00000604143 237 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC073413.2-201ENST00000604332 360 ntBASIC0.97□□□□□ -2.25
CD28P10747 AP001485.1-201ENST00000604799 199 ntBASIC0.97□□□□□ -2.25
CD28P10747 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.97□□□□□ -2.25
CD28P10747 Z99129.1-201ENST00000612510 255 ntBASIC0.97□□□□□ -2.25
CD28P10747 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.97□□□□□ -2.25
CD28P10747 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.97□□□□□ -2.25
CD28P10747 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.97□□□□□ -2.25
CD28P10747 MIR6863-201ENST00000636112 90 ntBASIC0.97□□□□□ -2.25
CD28P10747 ICE2P2-201ENST00000483823 2787 ntBASIC0.97□□□□□ -2.25
CD28P10747 OR4G1P-203ENST00000641984 1631 ntBASIC0.97□□□□□ -2.25
CD28P10747 AC100821.1-201ENST00000523153 2479 ntBASIC0.96□□□□□ -2.26
CD28P10747 MIR26B-201ENST00000362251 77 ntBASIC0.96□□□□□ -2.26
CD28P10747 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
CD28P10747 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
CD28P10747 RNU6-128P-201ENST00000383976 107 ntBASIC0.96□□□□□ -2.26
CD28P10747 RNU6-1042P-201ENST00000384204 107 ntBASIC0.96□□□□□ -2.26
CD28P10747 SNORD116-1-201ENST00000384335 95 ntBASIC0.96□□□□□ -2.26
CD28P10747 MIR150-201ENST00000385048 84 ntBASIC0.96□□□□□ -2.26
CD28P10747 MIR758-201ENST00000390227 88 ntBASIC0.96□□□□□ -2.26
CD28P10747 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.96□□□□□ -2.26
CD28P10747 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.96□□□□□ -2.26
CD28P10747 EIF1P1-201ENST00000421436 341 ntBASIC0.96□□□□□ -2.26
CD28P10747 ERLEC1P1-201ENST00000433806 578 ntBASIC0.96□□□□□ -2.26
CD28P10747 HMGN2P34-201ENST00000437647 269 ntBASIC0.96□□□□□ -2.26
CD28P10747 MTND1P29-201ENST00000448112 647 ntBASIC0.96□□□□□ -2.26
CD28P10747 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.96□□□□□ -2.26
CD28P10747 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.96□□□□□ -2.26
CD28P10747 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CD28P10747 RAB11AP2-201ENST00000545905 639 ntBASIC0.96□□□□□ -2.26
CD28P10747 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.96□□□□□ -2.26
CD28P10747 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.96□□□□□ -2.26
CD28P10747 SNRPGP20-201ENST00000604477 205 ntBASIC0.96□□□□□ -2.26
CD28P10747 AC097520.1-201ENST00000624435 385 ntBASIC0.96□□□□□ -2.26
CD28P10747 AL133216.2-202ENST00000634512 349 ntBASIC0.96□□□□□ -2.26
CD28P10747 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
CD28P10747 SNORD50.1-201ENST00000362987 71 ntBASIC0.95□□□□□ -2.26
CD28P10747 RNU6-254P-201ENST00000363377 107 ntBASIC0.95□□□□□ -2.26
CD28P10747 SNORD115-32-201ENST00000364079 82 ntBASIC0.95□□□□□ -2.26
CD28P10747 RNA5SP504-201ENST00000410676 117 ntBASIC0.95□□□□□ -2.26
CD28P10747 RNU2-7P-201ENST00000410794 178 ntBASIC0.95□□□□□ -2.26
CD28P10747 AC016909.1-201ENST00000415916 166 ntBASIC0.95□□□□□ -2.26
CD28P10747 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.95□□□□□ -2.26
CD28P10747 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.95□□□□□ -2.26
CD28P10747 USP9YP14-201ENST00000430663 563 ntBASIC0.95□□□□□ -2.26
CD28P10747 AC016717.1-201ENST00000448918 286 ntBASIC0.95□□□□□ -2.26
CD28P10747 RPL30P7-201ENST00000479312 323 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms