Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 RNU6-505P-201ENST00000384427 107 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
ZNF728P0DKX0 SNORD12-201ENST00000391002 90 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 RNU6-248P-201ENST00000410720 107 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
ZNF728P0DKX0 CDK8P2-201ENST00000415020 547 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC114482.1-201ENST00000418010 247 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC002429.1-201ENST00000437672 148 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 SNORD124-201ENST00000459577 104 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 SRRM1P2-201ENST00000464531 1192 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC007215.1-201ENST00000464893 276 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.54□□□□□ -2.32
ZNF728P0DKX0 MTND1P22-201ENST00000510572 951 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC025465.4-201ENST00000513422 638 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 RNU6-922P-201ENST00000516753 99 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 DEFB108E-201ENST00000524692 240 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC011604.1-201ENST00000545978 196 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AC009094.1-201ENST00000564443 426 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 AL359075.3-201ENST00000613288 217 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.54□□□□□ -2.32
ZNF728P0DKX0 MIR6788-201ENST00000618842 66 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 MTND4P5-201ENST00000435821 1374 ntBASIC0.54□□□□□ -2.32
ZNF728P0DKX0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
ZNF728P0DKX0 Y_RNA.124-201ENST00000363339 93 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 MIR548J-201ENST00000408833 112 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC008134.1-201ENST00000420943 193 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 MTND3P9-201ENST00000429526 346 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC245047.7-201ENST00000440265 293 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AL356010.1-201ENST00000456364 102 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.53□□□□□ -2.32
ZNF728P0DKX0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC105758.1-201ENST00000506038 399 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 PDCD5P2-201ENST00000507570 312 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 RNU6-759P-201ENST00000516740 103 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC025647.1-201ENST00000517879 253 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 HIF1AP1-201ENST00000553642 175 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC234772.3-201ENST00000602277 528 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC025449.1-201ENST00000603896 529 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 SNRPGP20-201ENST00000604477 205 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 GHRLOS.1-201ENST00000610995 70 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC087683.2-201ENST00000611384 326 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC122133.1-201ENST00000613964 233 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC068792.1-201ENST00000621354 417 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AL513423.1-201ENST00000621695 132 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC106754.2-201ENST00000623006 233 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 AC139792.3-201ENST00000623525 224 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 snoZ196.1-201ENST00000625269 89 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 SNORD3E-202ENST00000627253 216 ntBASIC0.53□□□□□ -2.32
ZNF728P0DKX0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.33
ZNF728P0DKX0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 RNU4-21P-201ENST00000362802 126 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 RNU6-1240P-201ENST00000365155 104 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 SNORA67.2-201ENST00000384300 149 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 RNU6-517P-201ENST00000384362 110 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC245047.3-201ENST00000429428 127 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC005002.2-201ENST00000438228 269 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 TRBVA-201ENST00000498804 316 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 SNORD79.1-201ENST00000516069 84 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 RNU6-197P-201ENST00000516680 100 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AL590705.4-201ENST00000532209 134 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 SUB1P2-201ENST00000556401 297 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 MIR151B-201ENST00000584249 96 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC008536.2-201ENST00000607284 349 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AL078596.1-201ENST00000624856 447 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 AC008873.1-201ENST00000625051 138 ntBASIC0.52□□□□□ -2.33
ZNF728P0DKX0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.52□□□□□ -2.33
ZNF728P0DKX0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ZNF728P0DKX0 FGF7P2-201ENST00000332473 296 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 RNU6-1120P-201ENST00000362988 108 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 MIR608-201ENST00000384820 100 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 SNORA12.1-201ENST00000390873 148 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 RNU6-440P-201ENST00000390882 105 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 MRPL42P3-201ENST00000401492 326 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.51□□□□□ -2.33
ZNF728P0DKX0 MTND4P32-201ENST00000437189 1237 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 RNU7-180P-201ENST00000459240 63 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 U8.21-201ENST00000459536 136 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 RNU6-221P-201ENST00000459541 99 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AF186996.7-201ENST00000492781 209 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 HMGB1P29-201ENST00000505659 499 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC090142.3-201ENST00000519012 385 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 MRPS36P4-201ENST00000534436 298 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC004812.1-201ENST00000540773 146 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AL121579.1-201ENST00000555129 305 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC027514.1-201ENST00000588561 1603 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC027449.1-201ENST00000608890 407 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms