Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
THBS1P07996 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
THBS1P07996 ZNF962P-201ENST00000443465 3140 ntBASIC3.76□□□□□ -1.81
THBS1P07996 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.76□□□□□ -1.81
THBS1P07996 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
THBS1P07996 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
THBS1P07996 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
THBS1P07996 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.75□□□□□ -1.81
THBS1P07996 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.75□□□□□ -1.81
THBS1P07996 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
THBS1P07996 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
THBS1P07996 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
THBS1P07996 Y_RNA.242-201ENST00000364473 110 ntBASIC3.75□□□□□ -1.81
THBS1P07996 RNU6-57P-201ENST00000411348 103 ntBASIC3.75□□□□□ -1.81
THBS1P07996 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.75□□□□□ -1.81
THBS1P07996 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.75□□□□□ -1.81
THBS1P07996 MRPS36P2-201ENST00000512569 299 ntBASIC3.75□□□□□ -1.81
THBS1P07996 AC026402.1-201ENST00000513642 170 ntBASIC3.75□□□□□ -1.81
THBS1P07996 RNA5SP236-201ENST00000516169 116 ntBASIC3.75□□□□□ -1.81
THBS1P07996 RN7SKP43-201ENST00000516173 320 ntBASIC3.75□□□□□ -1.81
THBS1P07996 RNU6-948P-201ENST00000516374 107 ntBASIC3.75□□□□□ -1.81
THBS1P07996 AC007751.1-201ENST00000529260 376 ntBASIC3.75□□□□□ -1.81
THBS1P07996 MIR8059-201ENST00000620427 81 ntBASIC3.75□□□□□ -1.81
THBS1P07996 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
THBS1P07996 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
THBS1P07996 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.75□□□□□ -1.81
THBS1P07996 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
THBS1P07996 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
THBS1P07996 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
THBS1P07996 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.74□□□□□ -1.81
THBS1P07996 MAPK10-253ENST00000641010 4072 ntBASIC3.74□□□□□ -1.81
THBS1P07996 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
THBS1P07996 AC010680.1-201ENST00000590024 3590 ntBASIC3.74□□□□□ -1.81
THBS1P07996 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
THBS1P07996 Y_RNA.66-201ENST00000362862 102 ntBASIC3.74□□□□□ -1.81
THBS1P07996 RNU6-1209P-201ENST00000363655 107 ntBASIC3.74□□□□□ -1.81
THBS1P07996 SNORD35B-201ENST00000363660 87 ntBASIC3.74□□□□□ -1.81
THBS1P07996 Y_RNA.796-201ENST00000364268 102 ntBASIC3.74□□□□□ -1.81
THBS1P07996 Y_RNA.799-201ENST00000364992 102 ntBASIC3.74□□□□□ -1.81
THBS1P07996 SNORD14D-201ENST00000384390 87 ntBASIC3.74□□□□□ -1.81
THBS1P07996 MIR134-201ENST00000385258 73 ntBASIC3.74□□□□□ -1.81
THBS1P07996 MIR1294-201ENST00000408503 142 ntBASIC3.74□□□□□ -1.81
THBS1P07996 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.74□□□□□ -1.81
THBS1P07996 AC008155.2-201ENST00000464337 397 ntBASIC3.74□□□□□ -1.81
THBS1P07996 RPL30P14-201ENST00000482744 348 ntBASIC3.74□□□□□ -1.81
THBS1P07996 RPS29P21-201ENST00000496272 170 ntBASIC3.74□□□□□ -1.81
THBS1P07996 AC093663.1-201ENST00000497190 394 ntBASIC3.74□□□□□ -1.81
THBS1P07996 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
THBS1P07996 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.74□□□□□ -1.81
THBS1P07996 RNU6-158P-201ENST00000517104 100 ntBASIC3.74□□□□□ -1.81
THBS1P07996 AC027419.1-201ENST00000522976 328 ntBASIC3.74□□□□□ -1.81
THBS1P07996 AC025627.2-201ENST00000576220 160 ntBASIC3.74□□□□□ -1.81
THBS1P07996 MIR1254-2-201ENST00000579553 63 ntBASIC3.74□□□□□ -1.81
THBS1P07996 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
THBS1P07996 AC107294.3-201ENST00000609211 526 ntBASIC3.74□□□□□ -1.81
THBS1P07996 AL137067.1-201ENST00000615933 120 ntBASIC3.74□□□□□ -1.81
THBS1P07996 Y_RNA.818-201ENST00000618813 71 ntBASIC3.74□□□□□ -1.81
THBS1P07996 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.74□□□□□ -1.81
THBS1P07996 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.74□□□□□ -1.81
THBS1P07996 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.74□□□□□ -1.81
THBS1P07996 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
THBS1P07996 Z82217.1-201ENST00000625157 8149 ntBASIC3.73□□□□□ -1.81
THBS1P07996 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
THBS1P07996 RNY4P6-201ENST00000363667 96 ntBASIC3.73□□□□□ -1.81
THBS1P07996 RNU6-820P-201ENST00000384273 107 ntBASIC3.73□□□□□ -1.81
THBS1P07996 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.73□□□□□ -1.81
THBS1P07996 AC091153.1-201ENST00000466297 402 ntBASIC3.73□□□□□ -1.81
THBS1P07996 Y_RNA.685-201ENST00000516532 108 ntBASIC3.73□□□□□ -1.81
THBS1P07996 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.73□□□□□ -1.81
THBS1P07996 RN7SL600P-201ENST00000581811 299 ntBASIC3.73□□□□□ -1.81
THBS1P07996 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.73□□□□□ -1.81
THBS1P07996 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
THBS1P07996 AL442128.1-201ENST00000615151 90 ntBASIC3.73□□□□□ -1.81
THBS1P07996 AC002064.3-201ENST00000623448 346 ntBASIC3.73□□□□□ -1.81
THBS1P07996 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
THBS1P07996 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.73□□□□□ -1.81
THBS1P07996 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
THBS1P07996 AL136360.1-201ENST00000503377 1900 ntBASIC3.73□□□□□ -1.81
THBS1P07996 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
THBS1P07996 UBE3AP2-201ENST00000429033 2259 ntBASIC3.73□□□□□ -1.81
THBS1P07996 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.73□□□□□ -1.81
THBS1P07996 AL596211.1-201ENST00000569873 2277 ntBASIC3.73□□□□□ -1.81
THBS1P07996 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.73□□□□□ -1.81
THBS1P07996 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
THBS1P07996 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
THBS1P07996 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
THBS1P07996 IPO8P1-201ENST00000455509 3109 ntBASIC3.73□□□□□ -1.81
THBS1P07996 AC000403.1-201ENST00000613696 3585 ntBASIC3.72□□□□□ -1.81
THBS1P07996 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
THBS1P07996 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
THBS1P07996 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
THBS1P07996 MAPK10-373ENST00000641983 6772 ntBASIC3.72□□□□□ -1.81
THBS1P07996 Y_RNA.486-201ENST00000384398 107 ntBASIC3.72□□□□□ -1.81
THBS1P07996 Y_RNA.549-201ENST00000384657 102 ntBASIC3.72□□□□□ -1.81
THBS1P07996 MIR759-201ENST00000390224 91 ntBASIC3.72□□□□□ -1.81
THBS1P07996 RPS27P22-201ENST00000478056 241 ntBASIC3.72□□□□□ -1.81
THBS1P07996 SNORA31.9-201ENST00000516429 84 ntBASIC3.72□□□□□ -1.81
THBS1P07996 MIR2114-201ENST00000516645 80 ntBASIC3.72□□□□□ -1.81
THBS1P07996 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.72□□□□□ -1.81
THBS1P07996 AC002076.2-201ENST00000617362 122 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms