Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-790P-201ENST00000384479 105 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HLA-DPB1P04440 BTF3P4-201ENST00000418852 495 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 MTATP6P26-201ENST00000445926 662 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 RNU6-314P-201ENST00000516574 104 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DPB1P04440 MIR3672-201ENST00000584290 82 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 AC023043.2-201ENST00000589678 1026 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 AL353149.1-201ENST00000610667 244 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DPB1P04440 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DPB1P04440 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DPB1P04440 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HLA-DPB1P04440 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 RNU6-414P-201ENST00000363705 104 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 RNU6-1019P-201ENST00000364424 107 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 MIR1267-201ENST00000408723 78 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 RNA5SP504-201ENST00000410676 117 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AL589823.1-201ENST00000429577 183 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 HMGN2P34-201ENST00000437647 269 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 HSPE1P24-201ENST00000450782 238 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 snoU13.9-201ENST00000458927 103 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 RNU1-123P-201ENST00000458950 160 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 MTCYBP18-201ENST00000501056 747 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AP003033.1-201ENST00000527244 415 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DPB1P04440 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AC006001.4-201ENST00000622243 395 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
HLA-DPB1P04440 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DPB1P04440 MIR378A-201ENST00000362177 66 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.135-201ENST00000363439 95 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 RNU6-1235P-201ENST00000384559 107 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.554-201ENST00000384672 102 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 RNU2-7P-201ENST00000410794 178 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 AC016909.1-201ENST00000415916 166 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 CST2P1-201ENST00000425770 87 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 AL445305.1-201ENST00000432577 575 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 JTBP1-201ENST00000441314 247 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 AC009474.2-201ENST00000451383 136 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 RNU6-498P-201ENST00000459468 107 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 MTCO2P30-201ENST00000503662 364 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 HMGN1P13-201ENST00000505795 138 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DPB1P04440 RNU6-948P-201ENST00000516374 107 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 RNU2-34P-201ENST00000516534 121 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 RNU6-256P-201ENST00000516747 97 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.13□□□□□ -2.23
HLA-DPB1P04440 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.13□□□□□ -2.23
HLA-DPB1P04440 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.13□□□□□ -2.23
HLA-DPB1P04440 MIR3942-201ENST00000585264 109 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 AP000942.3-201ENST00000603702 160 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 AC090617.10-201ENST00000624308 134 ntBASIC1.13□□□□□ -2.23
HLA-DPB1P04440 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DPB1P04440 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 MTND4P5-201ENST00000435821 1374 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 snoU2-30.2-201ENST00000362805 70 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.212-201ENST00000364177 102 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.530-201ENST00000384587 101 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 RNU6-331P-201ENST00000384724 107 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 MIR517A-201ENST00000385001 87 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 MIR586-201ENST00000385035 97 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 RNU6-1148P-201ENST00000410992 104 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 RNU6-57P-201ENST00000411348 103 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AL161935.2-201ENST00000414627 60 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AP1B1P2-201ENST00000416196 106 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AL353572.1-201ENST00000442490 417 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AC073910.1-201ENST00000445047 438 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 PCMTD1P1-201ENST00000455560 355 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 RNU7-57P-201ENST00000459540 60 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 RNU1-117P-201ENST00000517041 158 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 MTND1P5-201ENST00000517906 940 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 MIR3124-201ENST00000582636 67 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 SNRPGP20-201ENST00000604477 205 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 AC137590.2-201ENST00000619709 240 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 MIR8063-201ENST00000621930 81 ntBASIC1.12□□□□□ -2.23
HLA-DPB1P04440 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HLA-DPB1P04440 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.287-201ENST00000364853 94 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.414-201ENST00000384011 101 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 RNU6-306P-201ENST00000384617 107 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 RNU6-417P-201ENST00000384712 107 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 MIR32-201ENST00000384965 70 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 RNU6-360P-201ENST00000390944 104 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms