Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SNORD13-201ENST00000459299 104 ntBASIC1.98□□□□□ -2.09
VTNP04004 Y_RNA.661-201ENST00000516003 99 ntBASIC1.98□□□□□ -2.09
VTNP04004 RNA5SP458-201ENST00000516188 119 ntBASIC1.98□□□□□ -2.09
VTNP04004 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
VTNP04004 RNU5F-4P-201ENST00000516581 114 ntBASIC1.98□□□□□ -2.09
VTNP04004 RNU6-667P-201ENST00000517186 102 ntBASIC1.98□□□□□ -2.09
VTNP04004 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
VTNP04004 ANP32BP3-201ENST00000559213 706 ntBASIC1.98□□□□□ -2.09
VTNP04004 AC100812.1-201ENST00000607622 580 ntBASIC1.98□□□□□ -2.09
VTNP04004 RMST_6.1-201ENST00000611980 203 ntBASIC1.98□□□□□ -2.09
VTNP04004 AC090574.1-201ENST00000623186 233 ntBASIC1.98□□□□□ -2.09
VTNP04004 AC006026.1-201ENST00000444025 1803 ntBASIC1.98□□□□□ -2.09
VTNP04004 MTND5P10-201ENST00000603719 1809 ntBASIC1.98□□□□□ -2.09
VTNP04004 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.98□□□□□ -2.09
VTNP04004 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
VTNP04004 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VTNP04004 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VTNP04004 Y_RNA.106-201ENST00000363189 100 ntBASIC1.97□□□□□ -2.09
VTNP04004 SNORD32B-201ENST00000364460 84 ntBASIC1.97□□□□□ -2.09
VTNP04004 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
VTNP04004 Y_RNA.813-201ENST00000364639 102 ntBASIC1.97□□□□□ -2.09
VTNP04004 Y_RNA.319-201ENST00000365138 92 ntBASIC1.97□□□□□ -2.09
VTNP04004 U8.10-201ENST00000384260 133 ntBASIC1.97□□□□□ -2.09
VTNP04004 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.97□□□□□ -2.09
VTNP04004 AC007098.1-201ENST00000420122 367 ntBASIC1.97□□□□□ -2.09
VTNP04004 MTCYBP10-201ENST00000424905 650 ntBASIC1.97□□□□□ -2.09
VTNP04004 ELOCP24-201ENST00000456370 334 ntBASIC1.97□□□□□ -2.09
VTNP04004 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.97□□□□□ -2.09
VTNP04004 AC107393.1-201ENST00000512403 346 ntBASIC1.97□□□□□ -2.09
VTNP04004 RNA5SP137-201ENST00000516833 135 ntBASIC1.97□□□□□ -2.09
VTNP04004 RNU6-250P-201ENST00000516958 103 ntBASIC1.97□□□□□ -2.09
VTNP04004 AC022616.8-201ENST00000533569 253 ntBASIC1.97□□□□□ -2.09
VTNP04004 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.97□□□□□ -2.09
VTNP04004 AC004584.2-201ENST00000570407 410 ntBASIC1.97□□□□□ -2.09
VTNP04004 AC104581.2-201ENST00000572227 430 ntBASIC1.97□□□□□ -2.09
VTNP04004 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
VTNP04004 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.97□□□□□ -2.09
VTNP04004 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.97□□□□□ -2.09
VTNP04004 AC005520.5-201ENST00000613926 164 ntBASIC1.97□□□□□ -2.09
VTNP04004 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.97□□□□□ -2.09
VTNP04004 MIR1248-201ENST00000629190 106 ntBASIC1.97□□□□□ -2.09
VTNP04004 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
VTNP04004 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VTNP04004 RNU6-222P-201ENST00000362438 107 ntBASIC1.96□□□□□ -2.1
VTNP04004 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
VTNP04004 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
VTNP04004 MIR190B-201ENST00000401119 79 ntBASIC1.96□□□□□ -2.1
VTNP04004 RNU6-1156P-201ENST00000410365 100 ntBASIC1.96□□□□□ -2.1
VTNP04004 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
VTNP04004 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.96□□□□□ -2.1
VTNP04004 AL035666.1-201ENST00000446195 348 ntBASIC1.96□□□□□ -2.1
VTNP04004 RNU7-169P-201ENST00000459456 61 ntBASIC1.96□□□□□ -2.1
VTNP04004 AC105758.1-201ENST00000506038 399 ntBASIC1.96□□□□□ -2.1
VTNP04004 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
VTNP04004 RNU6-699P-201ENST00000517081 110 ntBASIC1.96□□□□□ -2.1
VTNP04004 RNU6-58P-201ENST00000517143 103 ntBASIC1.96□□□□□ -2.1
VTNP04004 SNORA31.25-201ENST00000517242 134 ntBASIC1.96□□□□□ -2.1
VTNP04004 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.96□□□□□ -2.1
VTNP04004 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
VTNP04004 NDUFA5P6-201ENST00000542110 379 ntBASIC1.96□□□□□ -2.1
VTNP04004 UBL5P4-201ENST00000562584 236 ntBASIC1.96□□□□□ -2.1
VTNP04004 MIR5701-3-201ENST00000578890 82 ntBASIC1.96□□□□□ -2.1
VTNP04004 MIR5006-201ENST00000583027 110 ntBASIC1.96□□□□□ -2.1
VTNP04004 MIR5701-1-201ENST00000585138 82 ntBASIC1.96□□□□□ -2.1
VTNP04004 AL050343.2-201ENST00000607338 280 ntBASIC1.96□□□□□ -2.1
VTNP04004 MIR5701-2-201ENST00000615634 82 ntBASIC1.96□□□□□ -2.1
VTNP04004 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
VTNP04004 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VTNP04004 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VTNP04004 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
VTNP04004 MTND5P16-201ENST00000460269 1703 ntBASIC1.95□□□□□ -2.1
VTNP04004 SNORD115-32-201ENST00000364079 82 ntBASIC1.95□□□□□ -2.1
VTNP04004 RNY3P11-201ENST00000364153 102 ntBASIC1.95□□□□□ -2.1
VTNP04004 Y_RNA.314-201ENST00000365114 102 ntBASIC1.95□□□□□ -2.1
VTNP04004 Y_RNA.358-201ENST00000365491 99 ntBASIC1.95□□□□□ -2.1
VTNP04004 RNU6-1040P-201ENST00000383974 107 ntBASIC1.95□□□□□ -2.1
VTNP04004 Y_RNA.431-201ENST00000384086 102 ntBASIC1.95□□□□□ -2.1
VTNP04004 RNU6-17P-201ENST00000384245 107 ntBASIC1.95□□□□□ -2.1
VTNP04004 RNU6-18P-201ENST00000384527 107 ntBASIC1.95□□□□□ -2.1
VTNP04004 Y_RNA.535-201ENST00000384612 99 ntBASIC1.95□□□□□ -2.1
VTNP04004 MIR320B2-201ENST00000408479 138 ntBASIC1.95□□□□□ -2.1
VTNP04004 AC004386.2-201ENST00000441858 148 ntBASIC1.95□□□□□ -2.1
VTNP04004 MTCO3P8-201ENST00000453691 755 ntBASIC1.95□□□□□ -2.1
VTNP04004 RNU7-14P-201ENST00000459331 62 ntBASIC1.95□□□□□ -2.1
VTNP04004 AP000870.1-201ENST00000472927 406 ntBASIC1.95□□□□□ -2.1
VTNP04004 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.95□□□□□ -2.1
VTNP04004 RPS23P5-201ENST00000495419 428 ntBASIC1.95□□□□□ -2.1
VTNP04004 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.95□□□□□ -2.1
VTNP04004 RNU6-1170P-201ENST00000515974 106 ntBASIC1.95□□□□□ -2.1
VTNP04004 RNU6-1098P-201ENST00000516772 96 ntBASIC1.95□□□□□ -2.1
VTNP04004 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.95□□□□□ -2.1
VTNP04004 AC018630.3-201ENST00000542637 96 ntBASIC1.95□□□□□ -2.1
VTNP04004 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.95□□□□□ -2.1
VTNP04004 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
VTNP04004 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.95□□□□□ -2.1
VTNP04004 MIR5695-201ENST00000579717 85 ntBASIC1.95□□□□□ -2.1
VTNP04004 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
VTNP04004 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
VTNP04004 SNRPGP20-201ENST00000604477 205 ntBASIC1.95□□□□□ -2.1
VTNP04004 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms