Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SNRPEP10-201ENST00000420249 274 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.96□□□□□ -2.26
MT-ND4P03905 MTCO1P20-201ENST00000425366 358 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AC108667.1-201ENST00000428618 249 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 RPS29P28-201ENST00000446439 141 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
MT-ND4P03905 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.96□□□□□ -2.26
MT-ND4P03905 AL442163.3-201ENST00000554110 156 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 CYP3A52P-201ENST00000563326 91 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.96□□□□□ -2.26
MT-ND4P03905 AL158209.2-201ENST00000619266 216 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AL353770.2-201ENST00000620024 78 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AC073534.2-201ENST00000620377 381 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AC097520.1-201ENST00000624435 385 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AC121333.1-201ENST00000567488 2709 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.95□□□□□ -2.26
MT-ND4P03905 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU6-1085P-201ENST00000363576 107 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 SNORD113-7-201ENST00000363762 77 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU6-933P-201ENST00000384424 107 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 RNA5SP109-201ENST00000391010 116 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 CALM2P3-201ENST00000400429 449 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.95□□□□□ -2.26
MT-ND4P03905 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.95□□□□□ -2.26
MT-ND4P03905 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AL606517.2-201ENST00000442855 241 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU7-187P-201ENST00000458985 68 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU7-34P-201ENST00000459394 64 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AL163195.1-201ENST00000496941 348 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 HMGN1P12-201ENST00000499125 195 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC093852.1-201ENST00000503587 266 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU6-1146P-201ENST00000516282 102 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC026407.1-201ENST00000518369 204 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 RAB11AP2-201ENST00000545905 639 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.95□□□□□ -2.26
MT-ND4P03905 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.95□□□□□ -2.26
MT-ND4P03905 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.95□□□□□ -2.26
MT-ND4P03905 RNU6-89P-201ENST00000606519 100 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC097065.2-201ENST00000608159 533 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AL133215.3-201ENST00000609801 448 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 AC009033.1-201ENST00000624279 431 ntBASIC0.95□□□□□ -2.26
MT-ND4P03905 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
MT-ND4P03905 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
MT-ND4P03905 SNORD50.1-201ENST00000362987 71 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 Y_RNA.231-201ENST00000364358 102 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 Y_RNA.372-201ENST00000365599 102 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 MIR515-2-201ENST00000384883 83 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 MIR515-1-201ENST00000384884 83 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
MT-ND4P03905 MTCO3P40-201ENST00000392516 676 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 RPL21P1-201ENST00000399532 476 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 MIR1253-201ENST00000408273 105 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 RNU2-66P-201ENST00000410650 161 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 RNA5SP504-201ENST00000410676 117 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 RNU6-1068P-201ENST00000410958 103 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AP1B1P2-201ENST00000416196 106 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.94□□□□□ -2.26
MT-ND4P03905 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.94□□□□□ -2.26
MT-ND4P03905 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.94□□□□□ -2.26
MT-ND4P03905 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.94□□□□□ -2.26
MT-ND4P03905 RPS26P45-201ENST00000471748 340 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 Y_RNA.688-201ENST00000516565 95 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 RNU6-405P-201ENST00000516637 110 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 RNU1-117P-201ENST00000517041 158 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.94□□□□□ -2.26
MT-ND4P03905 AC016957.1-201ENST00000534895 309 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AC026371.1-201ENST00000551867 419 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 TPRKBP2-201ENST00000565969 475 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AC137590.2-201ENST00000619709 240 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AC022079.1-201ENST00000621546 602 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AL078596.1-201ENST00000624856 447 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 AC008873.1-201ENST00000625051 138 ntBASIC0.94□□□□□ -2.26
MT-ND4P03905 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
MT-ND4P03905 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
MT-ND4P03905 RNU6-254P-201ENST00000363377 107 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 RNU6-259P-201ENST00000383999 107 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 SNORD116-9-201ENST00000384000 95 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 SNORD116-3-201ENST00000384287 95 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 SNORD116-7-201ENST00000384404 95 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 SNORD116-5-201ENST00000384462 95 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 RNU6-1065P-201ENST00000384513 106 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
MT-ND4P03905 BTF3P4-201ENST00000418852 495 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 SNX2P2-201ENST00000424553 323 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 MTATP6P17-201ENST00000431030 672 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC074290.1-201ENST00000448883 135 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 RPS27P1-201ENST00000450552 247 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC079354.2-201ENST00000453523 154 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.93□□□□□ -2.26
MT-ND4P03905 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.93□□□□□ -2.26
MT-ND4P03905 RNU6-344P-201ENST00000516635 111 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 Y_RNA.693-201ENST00000516641 110 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC025647.1-201ENST00000517879 253 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms