Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SCARNA4-201ENST00000629045 128 ntBASIC0.47□□□□□ -2.33
APOA1P02647 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
APOA1P02647 U3.8-201ENST00000363675 217 ntBASIC0.46□□□□□ -2.34
APOA1P02647 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.46□□□□□ -2.34
APOA1P02647 RNU6-456P-201ENST00000384493 107 ntBASIC0.46□□□□□ -2.34
APOA1P02647 RNU2-29P-201ENST00000410423 189 ntBASIC0.46□□□□□ -2.34
APOA1P02647 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.46□□□□□ -2.34
APOA1P02647 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
APOA1P02647 AC245047.8-201ENST00000456455 284 ntBASIC0.46□□□□□ -2.34
APOA1P02647 SNRPFP3-201ENST00000457792 225 ntBASIC0.46□□□□□ -2.34
APOA1P02647 AL137161.1-201ENST00000532231 390 ntBASIC0.46□□□□□ -2.34
APOA1P02647 MRPS36P4-201ENST00000534436 298 ntBASIC0.46□□□□□ -2.34
APOA1P02647 SUB1P2-201ENST00000556401 297 ntBASIC0.46□□□□□ -2.34
APOA1P02647 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.46□□□□□ -2.34
APOA1P02647 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.46□□□□□ -2.34
APOA1P02647 AL360219.1-201ENST00000610230 366 ntBASIC0.46□□□□□ -2.34
APOA1P02647 AC004223.4-201ENST00000612426 332 ntBASIC0.46□□□□□ -2.34
APOA1P02647 AL353997.5-201ENST00000618886 171 ntBASIC0.46□□□□□ -2.34
APOA1P02647 U6.73-201ENST00000619194 103 ntBASIC0.46□□□□□ -2.34
APOA1P02647 Y_RNA.123-201ENST00000363338 102 ntBASIC0.45□□□□□ -2.34
APOA1P02647 RNU6-1214P-201ENST00000363650 109 ntBASIC0.45□□□□□ -2.34
APOA1P02647 Y_RNA.327-201ENST00000365201 102 ntBASIC0.45□□□□□ -2.34
APOA1P02647 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.45□□□□□ -2.34
APOA1P02647 SNORD99-201ENST00000408612 74 ntBASIC0.45□□□□□ -2.34
APOA1P02647 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.45□□□□□ -2.34
APOA1P02647 CALM2P4-201ENST00000430810 426 ntBASIC0.45□□□□□ -2.34
APOA1P02647 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.45□□□□□ -2.34
APOA1P02647 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.45□□□□□ -2.34
APOA1P02647 TPT1P7-201ENST00000458300 517 ntBASIC0.45□□□□□ -2.34
APOA1P02647 AC108210.2-201ENST00000503681 201 ntBASIC0.45□□□□□ -2.34
APOA1P02647 AC022493.2-201ENST00000506122 481 ntBASIC0.45□□□□□ -2.34
APOA1P02647 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.45□□□□□ -2.34
APOA1P02647 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.45□□□□□ -2.34
APOA1P02647 SNORA70.12-201ENST00000516084 153 ntBASIC0.45□□□□□ -2.34
APOA1P02647 RNU6-344P-201ENST00000516635 111 ntBASIC0.45□□□□□ -2.34
APOA1P02647 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
APOA1P02647 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.45□□□□□ -2.34
APOA1P02647 ZNF204P-201ENST00000416749 2397 ntBASIC0.44□□□□□ -2.34
APOA1P02647 RNU6-606P-201ENST00000384721 111 ntBASIC0.44□□□□□ -2.34
APOA1P02647 MIR508-201ENST00000384857 115 ntBASIC0.44□□□□□ -2.34
APOA1P02647 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.44□□□□□ -2.34
APOA1P02647 MIR764-201ENST00000390811 85 ntBASIC0.44□□□□□ -2.34
APOA1P02647 HMGN1P14-201ENST00000412459 517 ntBASIC0.44□□□□□ -2.34
APOA1P02647 LINC01399-202ENST00000458450 244 ntBASIC0.44□□□□□ -2.34
APOA1P02647 RPL23AP94-201ENST00000512518 302 ntBASIC0.44□□□□□ -2.34
APOA1P02647 RN7SKP265-201ENST00000516448 223 ntBASIC0.44□□□□□ -2.34
APOA1P02647 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.44□□□□□ -2.34
APOA1P02647 AC027419.1-201ENST00000522976 328 ntBASIC0.44□□□□□ -2.34
APOA1P02647 AC004812.1-201ENST00000540773 146 ntBASIC0.44□□□□□ -2.34
APOA1P02647 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.44□□□□□ -2.34
APOA1P02647 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.44□□□□□ -2.34
APOA1P02647 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.44□□□□□ -2.34
APOA1P02647 MIR5583-1-201ENST00000580941 59 ntBASIC0.44□□□□□ -2.34
APOA1P02647 AP001506.1-201ENST00000615444 211 ntBASIC0.44□□□□□ -2.34
APOA1P02647 RNU6-424P-201ENST00000384367 105 ntBASIC0.43□□□□□ -2.34
APOA1P02647 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
APOA1P02647 U8.16-201ENST00000391279 133 ntBASIC0.43□□□□□ -2.34
APOA1P02647 Z99497.1-201ENST00000421282 135 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC092423.1-201ENST00000430165 186 ntBASIC0.43□□□□□ -2.34
APOA1P02647 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.43□□□□□ -2.34
APOA1P02647 AL121890.1-201ENST00000435457 205 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC093850.1-201ENST00000454121 251 ntBASIC0.43□□□□□ -2.34
APOA1P02647 U8.21-201ENST00000459536 136 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AF186996.7-201ENST00000492781 209 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AP002963.1-201ENST00000530590 184 ntBASIC0.43□□□□□ -2.34
APOA1P02647 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
APOA1P02647 AC025627.3-201ENST00000582078 182 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC245014.2-201ENST00000603689 287 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC246785.4-201ENST00000605374 287 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC092354.1-201ENST00000606057 376 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC087683.2-201ENST00000611384 326 ntBASIC0.43□□□□□ -2.34
APOA1P02647 AC137590.2-201ENST00000619709 240 ntBASIC0.43□□□□□ -2.34
APOA1P02647 ELL2P3-201ENST00000457883 1602 ntBASIC0.42□□□□□ -2.34
APOA1P02647 SNORA40.3-201ENST00000390964 122 ntBASIC0.42□□□□□ -2.34
APOA1P02647 RNU2-9P-201ENST00000410194 145 ntBASIC0.42□□□□□ -2.34
APOA1P02647 RNA5SP504-201ENST00000410676 117 ntBASIC0.42□□□□□ -2.34
APOA1P02647 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.42□□□□□ -2.34
APOA1P02647 AC104332.1-201ENST00000440471 797 ntBASIC0.42□□□□□ -2.34
APOA1P02647 MTCO2P7-201ENST00000446518 666 ntBASIC0.42□□□□□ -2.34
APOA1P02647 AC233266.1-201ENST00000454518 96 ntBASIC0.42□□□□□ -2.34
APOA1P02647 SNORA59A-201ENST00000459326 152 ntBASIC0.42□□□□□ -2.34
APOA1P02647 FGF7P1-201ENST00000582820 288 ntBASIC0.42□□□□□ -2.34
APOA1P02647 AC234772.3-201ENST00000602277 528 ntBASIC0.42□□□□□ -2.34
APOA1P02647 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
APOA1P02647 SNORD11B-201ENST00000607707 90 ntBASIC0.42□□□□□ -2.34
APOA1P02647 AL096861.1-201ENST00000610899 123 ntBASIC0.42□□□□□ -2.34
APOA1P02647 AC242852.1-201ENST00000612151 96 ntBASIC0.42□□□□□ -2.34
APOA1P02647 AC244015.1-201ENST00000622301 99 ntBASIC0.42□□□□□ -2.34
APOA1P02647 RNU6-1266P-201ENST00000362794 105 ntBASIC0.41□□□□□ -2.34
APOA1P02647 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
APOA1P02647 Y_RNA.265-201ENST00000364677 108 ntBASIC0.41□□□□□ -2.34
APOA1P02647 RNU6-282P-201ENST00000365357 103 ntBASIC0.41□□□□□ -2.34
APOA1P02647 SNORD89-201ENST00000390981 114 ntBASIC0.41□□□□□ -2.34
APOA1P02647 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.41□□□□□ -2.34
APOA1P02647 AL033528.1-201ENST00000453780 140 ntBASIC0.41□□□□□ -2.34
APOA1P02647 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.41□□□□□ -2.34
APOA1P02647 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.41□□□□□ -2.34
APOA1P02647 AC005178.1-201ENST00000508392 440 ntBASIC0.41□□□□□ -2.34
APOA1P02647 MTATP6P9-201ENST00000515039 680 ntBASIC0.41□□□□□ -2.34
APOA1P02647 SNORD111.1-201ENST00000516421 86 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms