Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SNORD42.2-201ENST00000365570 69 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 Y_RNA.395-201ENST00000383945 109 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 Y_RNA.419-201ENST00000384041 102 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 Y_RNA.428-201ENST00000384078 102 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AL033519.2-201ENST00000403958 392 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC114482.1-201ENST00000418010 247 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 CR769767.1-201ENST00000436337 346 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC074290.1-201ENST00000448883 135 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 Y_RNA.639-201ENST00000458981 102 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 HMGN1P13-201ENST00000505795 138 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 RNA5SP281-201ENST00000516504 135 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC091144.1-201ENST00000519573 138 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 CYCSP23-201ENST00000519781 313 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.09□□□□□ -2.07
NKX2-2O95096 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.09□□□□□ -2.07
NKX2-2O95096 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX2-2O95096 MIR3169-201ENST00000578032 83 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC078899.2-201ENST00000595282 212 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
NKX2-2O95096 MZT1P2-201ENST00000604387 248 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC130454.1-201ENST00000622948 401 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC090574.1-201ENST00000623186 233 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 AC138305.3-201ENST00000624988 240 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.09□□□□□ -2.08
NKX2-2O95096 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NKX2-2O95096 AC006026.1-201ENST00000444025 1803 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 Y_RNA.112-201ENST00000363250 102 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 Y_RNA.314-201ENST00000365114 102 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU1-115P-201ENST00000365329 160 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 Y_RNA.415-201ENST00000384012 112 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU6-1145P-201ENST00000384246 107 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 Y_RNA.496-201ENST00000384444 101 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU6-1235P-201ENST00000384559 107 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RPS20P15-201ENST00000412792 311 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 AC018865.2-201ENST00000423631 129 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX2-2O95096 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX2-2O95096 AC010095.1-201ENST00000443543 144 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU6-498P-201ENST00000459468 107 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU6-911P-201ENST00000516523 104 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RN7SKP49-201ENST00000516675 260 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 RNU1-117P-201ENST00000517041 158 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 SNORD116.3-201ENST00000517176 78 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 AC022868.1-201ENST00000517767 391 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX2-2O95096 AL590240.4-201ENST00000616908 390 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
NKX2-2O95096 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
NKX2-2O95096 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NKX2-2O95096 RNA5SP361-201ENST00000362686 118 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 RNU6-23P-201ENST00000363283 107 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 RNU6-727P-201ENST00000363592 107 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 RNU6-879P-201ENST00000364328 108 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 RNU6-418P-201ENST00000384035 107 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 RNU6-318P-201ENST00000384283 103 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 RNA5SP450-201ENST00000411206 102 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 MTND2P29-201ENST00000438595 412 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-2O95096 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.07□□□□□ -2.08
NKX2-2O95096 AK6P2-201ENST00000549020 471 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.07□□□□□ -2.08
NKX2-2O95096 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX2-2O95096 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX2-2O95096 RNU6-1301P-201ENST00000362724 104 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 SNORD87-201ENST00000364849 89 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 XGY1-201ENST00000381172 446 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 Y_RNA.605-201ENST00000410577 105 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 AL137792.2-201ENST00000443484 235 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 AC007677.1-201ENST00000445757 515 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 RNU7-57P-201ENST00000459540 60 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 AP002770.2-201ENST00000543613 532 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 AL442163.3-201ENST00000554110 156 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX2-2O95096 AC090971.5-201ENST00000621102 293 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 uc_338.22-201ENST00000622722 187 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX2-2O95096 MTND4P29-201ENST00000503122 1372 ntBASIC2.06□□□□□ -2.08
NKX2-2O95096 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.06□□□□□ -2.08
NKX2-2O95096 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX2-2O95096 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 RNU4-82P-201ENST00000362443 140 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 Y_RNA.111-201ENST00000363248 100 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 RNY3P11-201ENST00000364153 102 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 MIR548B-201ENST00000385247 97 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NKX2-2O95096 Y_RNA.595-201ENST00000410403 105 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 RNU4-53P-201ENST00000410828 140 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 HMGN2P3-201ENST00000433603 273 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 HMGN2P5-201ENST00000436882 273 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 AL353689.1-201ENST00000438895 199 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms