Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC126177.8-201ENST00000618339 1015 ntBASIC1.25□□□□□ -2.21
UPK3AO75631 MTND5P35-201ENST00000557537 1720 ntBASIC1.25□□□□□ -2.21
UPK3AO75631 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
UPK3AO75631 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UPK3AO75631 BX322639.1-202ENST00000423987 2213 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 RNU6-1305P-201ENST00000364353 104 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 SNORA72.2-201ENST00000365028 127 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 RNU6-784P-201ENST00000384330 106 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 MIR487A-201ENST00000385009 80 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AL117342.1-201ENST00000404861 406 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.24□□□□□ -2.21
UPK3AO75631 MTCO1P20-201ENST00000425366 358 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AC009237.7-201ENST00000447357 229 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 NFU1P2-201ENST00000448700 469 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AC114982.1-201ENST00000469402 321 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK3AO75631 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK3AO75631 Y_RNA.665-201ENST00000516177 98 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.24□□□□□ -2.21
UPK3AO75631 DNAJC19P9-201ENST00000555084 351 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AL160236.1-201ENST00000556317 195 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 ZNF519P2-201ENST00000557032 169 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AC023043.2-201ENST00000589678 1026 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 SNRPGP20-201ENST00000604477 205 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AL355802.3-201ENST00000607571 545 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 AL133215.3-201ENST00000609801 448 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
UPK3AO75631 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK3AO75631 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 MTND4P5-201ENST00000435821 1374 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 RNU6-128P-201ENST00000383976 107 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 MRPL35P1-201ENST00000404272 572 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 COX6CP10-201ENST00000416832 224 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 Z82205.1-201ENST00000428456 297 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 NDUFA5P4-201ENST00000436704 385 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AC092473.1-201ENST00000441098 221 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 snoU13.27-201ENST00000459278 104 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK3AO75631 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 RNU6-948P-201ENST00000516374 107 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AC016957.1-201ENST00000534895 309 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 RAB11AP2-201ENST00000545905 639 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AL161670.1-201ENST00000554348 137 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AL078604.3-201ENST00000615580 211 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AC048344.4-201ENST00000619744 527 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 AC006001.4-201ENST00000622243 395 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 SCARNA4-201ENST00000629045 128 ntBASIC1.23□□□□□ -2.21
UPK3AO75631 ZNF204P-201ENST00000416749 2397 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
UPK3AO75631 RNU1-62P-201ENST00000362599 164 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 Y_RNA.151-201ENST00000363566 112 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 RNU6-975P-201ENST00000384296 105 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AL590002.1-201ENST00000406554 418 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 RNU6-908P-201ENST00000410160 94 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AL161935.2-201ENST00000414627 60 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AL353572.1-201ENST00000442490 417 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 Z83846.1-201ENST00000446798 265 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AC074290.1-201ENST00000448883 135 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AC007215.1-201ENST00000464893 276 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 RPL23AP75-201ENST00000491601 451 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK3AO75631 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AC024909.2-201ENST00000553035 286 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AC245505.1-201ENST00000556398 224 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK3AO75631 AC137590.2-201ENST00000619709 240 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 AC099654.12-201ENST00000639868 649 ntBASIC1.22□□□□□ -2.21
UPK3AO75631 Y_RNA.194-201ENST00000363985 102 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU4-75P-201ENST00000364621 146 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 Y_RNA.517-201ENST00000384551 106 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU6-1235P-201ENST00000384559 107 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU6-331P-201ENST00000384724 107 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 MIR515-2-201ENST00000384883 83 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 MIR515-1-201ENST00000384884 83 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
UPK3AO75631 MIR320B2-201ENST00000408479 138 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 BTF3P4-201ENST00000418852 495 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.21□□□□□ -2.22
UPK3AO75631 EIF1P1-201ENST00000421436 341 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3AO75631 AL590632.1-201ENST00000424289 371 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 PCMTD1P1-201ENST00000455560 355 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU7-95P-201ENST00000459222 64 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU6-498P-201ENST00000459468 107 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU6-1146P-201ENST00000516282 102 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU6-314P-201ENST00000516574 104 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RNU1-117P-201ENST00000517041 158 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms