Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR9-1-201ENST00000385198 89 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 AL512633.1-201ENST00000399931 655 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 RPL19P1-201ENST00000411635 428 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 POLR2KP2-201ENST00000438155 177 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 RPS3P1-201ENST00000456781 192 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.650-201ENST00000459002 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 RNU6-625P-201ENST00000459412 107 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 AC091179.3-201ENST00000474761 144 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.777-201ENST00000516982 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 EIF4A1P12-201ENST00000551910 141 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.49□□□□□ -1.85
VAMP4O75379 AC026470.2-201ENST00000561492 181 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.771-201ENST00000598668 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.789-201ENST00000622480 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP4O75379 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.49□□□□□ -1.85
VAMP4O75379 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP4O75379 RNU4-15P-201ENST00000362613 141 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 SNORA51.4-201ENST00000364993 124 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 SNORA46.1-201ENST00000391069 153 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 RNU2-52P-201ENST00000410680 190 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 Y_RNA.793-201ENST00000411222 111 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.48□□□□□ -1.85
VAMP4O75379 RPL23AP70-201ENST00000483361 460 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.48□□□□□ -1.85
VAMP4O75379 RNA5SP356-201ENST00000515972 94 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 RNU6-56P-201ENST00000516986 93 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 Z83818.1-201ENST00000603584 150 ntBASIC3.48□□□□□ -1.85
VAMP4O75379 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.48□□□□□ -1.85
VAMP4O75379 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VAMP4O75379 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
VAMP4O75379 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 RNU6-1210P-201ENST00000363775 107 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 Y_RNA.270-201ENST00000364693 104 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 Y_RNA.292-201ENST00000364904 97 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 SNORA72.2-201ENST00000365028 127 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 Y_RNA.418-201ENST00000384029 102 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 RNU6-514P-201ENST00000384208 107 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 RNU6-886P-201ENST00000384319 105 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 Y_RNA.626-201ENST00000411288 95 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 RAB28P5-201ENST00000427490 651 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 AC104332.1-201ENST00000440471 797 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 IFNA11P-201ENST00000446352 526 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 NDUFB4P10-201ENST00000452541 359 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 RNU7-120P-201ENST00000459334 63 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 AC091959.1-201ENST00000495857 238 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 RAC1P5-201ENST00000512182 576 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 SNORA9.3-201ENST00000516383 129 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 AC079598.5-201ENST00000547460 117 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 AC055872.1-201ENST00000570978 278 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 AC002064.3-201ENST00000623448 346 ntBASIC3.47□□□□□ -1.85
VAMP4O75379 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.47□□□□□ -1.85
VAMP4O75379 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.47□□□□□ -1.85
VAMP4O75379 RNU1-57P-201ENST00000384491 166 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 MIR186-201ENST00000384988 86 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 MIR549A-201ENST00000385268 96 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.46□□□□□ -1.86
VAMP4O75379 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.46□□□□□ -1.86
VAMP4O75379 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.46□□□□□ -1.86
VAMP4O75379 Z96811.1-201ENST00000445880 108 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.46□□□□□ -1.86
VAMP4O75379 AP001324.2-201ENST00000461163 319 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 AC011921.3-201ENST00000605540 361 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 AC004467.1-201ENST00000615678 330 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VAMP4O75379 AC135776.4-201ENST00000624300 1904 ntBASIC3.46□□□□□ -1.86
VAMP4O75379 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.46□□□□□ -1.86
VAMP4O75379 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.46□□□□□ -1.86
VAMP4O75379 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VAMP4O75379 AC108206.1-201ENST00000570186 4159 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAMP4O75379 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAMP4O75379 RNU6-655P-201ENST00000362858 107 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 Y_RNA.150-201ENST00000363562 102 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 U3.9-201ENST00000363823 204 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAMP4O75379 DYNLT3P1-201ENST00000378574 347 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 SNORD21-201ENST00000383953 95 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 RNU2-61P-201ENST00000411069 191 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 SNORD109B-201ENST00000458961 67 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 SNORD109A-201ENST00000459128 67 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.45□□□□□ -1.86
VAMP4O75379 AL121594.1-201ENST00000475906 575 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 RNU6-344P-201ENST00000516635 111 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.45□□□□□ -1.86
VAMP4O75379 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.45□□□□□ -1.86
VAMP4O75379 TCL6_2.1-201ENST00000615162 119 ntBASIC3.45□□□□□ -1.86
VAMP4O75379 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.45□□□□□ -1.86
VAMP4O75379 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.44□□□□□ -1.86
VAMP4O75379 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP4O75379 AC062016.1-201ENST00000355719 319 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 Y_RNA.101-201ENST00000363154 102 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 RNU1-105P-201ENST00000363470 161 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP4O75379 MIR548M-201ENST00000408260 86 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 Y_RNA.590-201ENST00000410140 107 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 RNU6-1199P-201ENST00000411249 104 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.44□□□□□ -1.86
VAMP4O75379 MRPS10P1-201ENST00000448483 130 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms