Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MTCO3P29-201ENST00000432119 779 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 FTH1P12-201ENST00000432137 551 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.98□□□□□ -2.25
NPHP4O75161 snoU13.27-201ENST00000459278 104 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 GMFBP1-201ENST00000467831 427 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MTND3P7-201ENST00000474435 343 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 CCDC34P1-201ENST00000507441 517 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.98□□□□□ -2.25
NPHP4O75161 AC009033.1-201ENST00000624279 431 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MIR338-201ENST00000636369 67 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MIR6866-201ENST00000638146 69 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 BX322639.1-202ENST00000423987 2213 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 RNA5SP219-201ENST00000390940 113 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 AL356776.1-201ENST00000406574 447 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 MIR1283-1-201ENST00000408494 87 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 RNA5SP481-201ENST00000516814 122 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 RNU11-2P-201ENST00000516898 142 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 RNU6-612P-201ENST00000516909 102 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.97□□□□□ -2.25
NPHP4O75161 NIFKP6-201ENST00000598115 845 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 AC064836.2-201ENST00000609491 462 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 AL391262.2-201ENST00000622466 494 ntBASIC0.97□□□□□ -2.25
NPHP4O75161 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.97□□□□□ -2.25
NPHP4O75161 RNU6-562P-201ENST00000362731 107 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 RNU6-1120P-201ENST00000362988 108 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.96□□□□□ -2.26
NPHP4O75161 SNORA29-201ENST00000384183 140 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 RNU6-517P-201ENST00000384362 110 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AC004866.1-201ENST00000411748 78 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AC092628.1-201ENST00000436250 252 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AC004386.2-201ENST00000441858 148 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 MTCO2P3-201ENST00000442543 421 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.96□□□□□ -2.26
NPHP4O75161 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.96□□□□□ -2.26
NPHP4O75161 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.96□□□□□ -2.26
NPHP4O75161 RNU7-180P-201ENST00000459240 63 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 RNU6-1038P-201ENST00000516516 104 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 RNU6-430P-201ENST00000517078 107 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AC104576.1-201ENST00000524225 88 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 MRPS36P4-201ENST00000534436 298 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AL442163.3-201ENST00000554110 156 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 MIR5006-201ENST00000583027 110 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 Z94722.1-201ENST00000604328 474 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 HULC.1-201ENST00000612720 240 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AC072046.2-201ENST00000618366 268 ntBASIC0.96□□□□□ -2.26
NPHP4O75161 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.96□□□□□ -2.26
NPHP4O75161 Y_RNA.255-201ENST00000364581 97 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 COX6CP10-201ENST00000416832 224 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 CST2P1-201ENST00000425770 87 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.95□□□□□ -2.26
NPHP4O75161 MTND1P27-201ENST00000451117 902 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 RPS29P27-201ENST00000463711 170 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 RPL30P7-201ENST00000479312 323 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AC079140.5-201ENST00000507882 310 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 MIR4753-201ENST00000585119 83 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 RPL17P51-201ENST00000605218 238 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AL355802.3-201ENST00000607571 545 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AC104458.1-201ENST00000608243 463 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AP001596.2-201ENST00000608410 312 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 RMST_3.1-201ENST00000611651 109 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 uc_338.34-201ENST00000617467 174 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AL354950.2-201ENST00000617939 290 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AL603755.1-201ENST00000619504 163 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AL136221.1-201ENST00000621449 509 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 AC006001.4-201ENST00000622243 395 ntBASIC0.95□□□□□ -2.26
NPHP4O75161 RNU6-417P-201ENST00000384712 107 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
NPHP4O75161 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.94□□□□□ -2.26
NPHP4O75161 EIF1P1-201ENST00000421436 341 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AC098934.3-201ENST00000430450 190 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.94□□□□□ -2.26
NPHP4O75161 MTCO3P8-201ENST00000453691 755 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AL356010.1-201ENST00000456364 102 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 RNU7-63P-201ENST00000459054 62 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 RNU7-138P-201ENST00000459479 64 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AC103851.1-201ENST00000506833 274 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AC025465.4-201ENST00000513422 638 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 RNU6-1069P-201ENST00000516612 133 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AL391840.1-201ENST00000571144 367 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 Z99497.2-201ENST00000603634 310 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 MZT1P2-201ENST00000604387 248 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 AC005562.2-201ENST00000618264 111 ntBASIC0.94□□□□□ -2.26
NPHP4O75161 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.94□□□□□ -2.26
NPHP4O75161 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
NPHP4O75161 RNU6-1317P-201ENST00000364582 104 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 RNU6-996P-201ENST00000365438 107 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 RNU6-348P-201ENST00000384386 107 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 MIR487A-201ENST00000385009 80 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 RNA5SP109-201ENST00000391010 116 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 RNA5SP467-201ENST00000391274 118 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 MIR300-201ENST00000401138 83 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 RN7SKP142-201ENST00000411236 328 ntBASIC0.93□□□□□ -2.26
NPHP4O75161 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.93□□□□□ -2.26
NPHP4O75161 AC073415.1-201ENST00000449240 153 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms