Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 U3.4-201ENST00000363352 213 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 SNORA42.1-201ENST00000363515 137 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 RNU6-975P-201ENST00000384296 105 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 RN7SKP266-201ENST00000410232 287 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 AC016909.1-201ENST00000415916 166 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 RNU6-917P-201ENST00000516294 104 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
SIPA1L3O60292 MIR548AX-201ENST00000580117 73 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 VN1R87P-201ENST00000596706 487 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 AC234772.3-201ENST00000602277 528 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 AP000484.1-201ENST00000620067 1252 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 MIR6079-201ENST00000635807 62 ntBASIC-0.25□□□□□ -2.45
SIPA1L3O60292 MIR18A-201ENST00000362310 71 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 RNU6-354P-201ENST00000383862 107 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 RNU6-610P-201ENST00000384264 107 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 AC106883.1-201ENST00000418805 562 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 AC079382.1-201ENST00000493346 557 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 RNU4-5P-201ENST00000607255 135 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
SIPA1L3O60292 AL356596.1-201ENST00000624230 379 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 AL157786.1-207ENST00000627771 695 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.26□□□□□ -2.45
SIPA1L3O60292 RNU6-207P-201ENST00000384137 107 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 RNU6-994P-201ENST00000410507 111 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 CDK8P2-201ENST00000415020 547 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC091874.1-201ENST00000511402 339 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 MIR3146-201ENST00000580367 79 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC078880.5-201ENST00000617845 421 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 MIR1185-1-201ENST00000408598 86 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 SNORA40.8-201ENST00000411034 126 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 TIMM9P3-201ENST00000428659 274 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC112693.2-201ENST00000556538 232 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC009994.1-201ENST00000606889 253 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC104458.1-201ENST00000608243 463 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC008250.2-201ENST00000615261 205 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 AC097460.3-201ENST00000623099 442 ntBASIC-0.27□□□□□ -2.45
SIPA1L3O60292 RNU6-792P-201ENST00000363490 107 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 RNU6-25P-201ENST00000383873 107 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 RNU6-48P-201ENST00000384161 107 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 RNU6-15P-201ENST00000384534 107 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 RNU6-29P-201ENST00000384637 107 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AC114491.1-201ENST00000416095 246 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AC090960.1-201ENST00000421072 306 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AL139396.1-201ENST00000421137 167 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AP000542.1-201ENST00000448473 371 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.28□□□□□ -2.45
SIPA1L3O60292 RNU6-320P-201ENST00000516511 106 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 OR8K2P-201ENST00000524645 927 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 MTND4LP25-201ENST00000570218 163 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AC078795.3-201ENST00000602913 472 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 SNORA28-201ENST00000606769 126 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AC122133.1-201ENST00000613964 233 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 MIR8084-201ENST00000614105 89 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 AC090517.2-201ENST00000614966 680 ntBASIC-0.28□□□□□ -2.45
SIPA1L3O60292 RNU6-692P-201ENST00000384496 107 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 MIR593-201ENST00000384856 100 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 MRPL42P3-201ENST00000401492 326 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 RNU2-3P-201ENST00000410144 191 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AC092809.3-201ENST00000415453 231 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AC016632.1-201ENST00000503994 196 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 RNU6-567P-201ENST00000516746 107 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AC131159.1-201ENST00000621854 213 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 U6.108-201ENST00000637764 58 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
SIPA1L3O60292 SNORD118-201ENST00000363593 134 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 MIR145-201ENST00000384967 88 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 MIR891A-201ENST00000401237 79 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 MIR892B-201ENST00000401279 77 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 RNA5SP266-201ENST00000410273 108 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AL133396.1-201ENST00000432048 687 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 HSFY5P-201ENST00000453726 309 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 RNU7-57P-201ENST00000459540 60 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 DEFB130C-202ENST00000530001 230 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AL096861.1-201ENST00000610899 123 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.29□□□□□ -2.46
SIPA1L3O60292 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.29□□□□□ -2.46
SIPA1L3O60292 SNORD114-5-201ENST00000362928 70 ntBASIC-0.3□□□□□ -2.46
SIPA1L3O60292 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.3□□□□□ -2.46
SIPA1L3O60292 SNORA2B-201ENST00000384583 137 ntBASIC-0.3□□□□□ -2.46
SIPA1L3O60292 U8.16-201ENST00000391279 133 ntBASIC-0.3□□□□□ -2.46
SIPA1L3O60292 AL353777.1-201ENST00000425552 326 ntBASIC-0.3□□□□□ -2.46
SIPA1L3O60292 HSFY7P-201ENST00000432672 318 ntBASIC-0.3□□□□□ -2.46
SIPA1L3O60292 USP9YP28-201ENST00000435142 589 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms