Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC087477.1-201ENST00000465747 340 ntBASIC2.53□□□□□ -2
SLC28A2O43868 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.53□□□□□ -2
SLC28A2O43868 AC027176.1-201ENST00000560204 514 ntBASIC2.53□□□□□ -2
SLC28A2O43868 MIR4643-201ENST00000577473 78 ntBASIC2.53□□□□□ -2
SLC28A2O43868 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
SLC28A2O43868 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.53□□□□□ -2
SLC28A2O43868 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC28A2O43868 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SLC28A2O43868 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A2O43868 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A2O43868 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A2O43868 Y_RNA.54-201ENST00000362766 105 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU5B-2P-201ENST00000363036 113 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 Y_RNA.226-201ENST00000364337 114 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 Y_RNA.269-201ENST00000364685 89 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 Y_RNA.274-201ENST00000364714 101 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU6-102P-201ENST00000384485 104 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU1-139P-201ENST00000391307 165 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC28A2O43868 AL358075.3-201ENST00000426289 226 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC28A2O43868 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC28A2O43868 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC28A2O43868 AC107626.1-201ENST00000471084 183 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RPL23AP70-201ENST00000483361 460 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 MRPL42P6-201ENST00000486397 371 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 MRPS36P2-201ENST00000512569 299 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU6-496P-201ENST00000516145 99 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 SCARNA24.2-201ENST00000516968 130 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 RNU6-182P-201ENST00000516970 105 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 ACA59.2-201ENST00000517061 156 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC28A2O43868 RRN3P3-201ENST00000549207 578 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 AC026470.2-201ENST00000561492 181 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 AC024581.2-201ENST00000619986 252 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 CTSLP2-204ENST00000629029 392 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A2O43868 AL355596.1-201ENST00000565399 3996 ntBASIC2.52□□□□□ -2.01
SLC28A2O43868 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC28A2O43868 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC28A2O43868 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC28A2O43868 RNU6-1266P-201ENST00000362794 105 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 Y_RNA.118-201ENST00000363300 101 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RNU6-879P-201ENST00000364328 108 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RNU6-926P-201ENST00000384075 107 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 SNORD63-201ENST00000384262 68 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RNU6-843P-201ENST00000384454 104 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 MIR487A-201ENST00000385009 80 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 MIR153-2-201ENST00000385225 87 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RNA5SP21-201ENST00000410917 96 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RNU6-1245P-201ENST00000411130 106 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 PIGPP3-201ENST00000425307 415 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 HMGN2P3-201ENST00000433603 273 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 AC112220.1-201ENST00000434628 355 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 HMGN2P5-201ENST00000436882 273 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 RN7SKP40-201ENST00000517211 242 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 SNORA31.23-201ENST00000517219 133 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 SNORA81.3-201ENST00000517283 198 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC28A2O43868 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 AL356157.2-201ENST00000605122 111 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 BX284668.6-201ENST00000606899 438 ntBASIC2.51□□□□□ -2.01
SLC28A2O43868 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SLC28A2O43868 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SLC28A2O43868 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SLC28A2O43868 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.5□□□□□ -2.01
SLC28A2O43868 RNA5SP361-201ENST00000362686 118 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 U8.10-201ENST00000384260 133 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 MIR544A-201ENST00000384855 91 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC28A2O43868 AL139156.1-201ENST00000412785 841 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 PTGES3P4-201ENST00000426243 356 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 WARS2P1-201ENST00000429678 537 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC28A2O43868 HSPE1P25-201ENST00000455484 251 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 PRELID3BP1-201ENST00000457142 540 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 AP001025.1-201ENST00000486139 332 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 RNU6-1114P-201ENST00000516022 107 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 RNU4-71P-201ENST00000516258 113 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 RPPH1-2P-201ENST00000516688 293 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 Y_RNA.700-201ENST00000516806 100 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 AC027288.2-201ENST00000553028 243 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 AC009163.5-201ENST00000575421 637 ntBASIC2.5□□□□□ -2.01
SLC28A2O43868 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC28A2O43868 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SLC28A2O43868 RNA5SP289-201ENST00000362332 137 ntBASIC2.49□□□□□ -2.01
SLC28A2O43868 RNU6-858P-201ENST00000362436 107 ntBASIC2.49□□□□□ -2.01
SLC28A2O43868 RNU6-280P-201ENST00000364145 104 ntBASIC2.49□□□□□ -2.01
SLC28A2O43868 SNORD114-30-201ENST00000364448 72 ntBASIC2.49□□□□□ -2.01
SLC28A2O43868 Y_RNA.297-201ENST00000364950 91 ntBASIC2.49□□□□□ -2.01
SLC28A2O43868 RNU6-281P-201ENST00000384212 103 ntBASIC2.49□□□□□ -2.01
SLC28A2O43868 SNORA36A-201ENST00000384221 132 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms