Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ACTN4O43707 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ACTN4O43707 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.41□□□□□ -1.7
ACTN4O43707 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTN4O43707 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.7
ACTN4O43707 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
ACTN4O43707 MIR494-201ENST00000349529 81 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 RNU6-1292P-201ENST00000383856 107 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 RNU1-89P-201ENST00000384592 164 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ACTN4O43707 AC063976.3-201ENST00000426849 329 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 MTATP8P2-201ENST00000435212 202 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AC018634.1-201ENST00000437554 401 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AL500522.2-201ENST00000448562 343 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AC009220.1-201ENST00000451614 275 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 S100A11P1-201ENST00000477525 312 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AC096725.1-201ENST00000514266 313 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AC091167.4-201ENST00000605079 184 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AC025521.1-201ENST00000621624 286 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 AC006435.5-201ENST00000624486 112 ntBASIC4.4□□□□□ -1.71
ACTN4O43707 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN4O43707 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN4O43707 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTN4O43707 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTN4O43707 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTN4O43707 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTN4O43707 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTN4O43707 RNY4P6-201ENST00000363667 96 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 RNU6-975P-201ENST00000384296 105 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 RNU6-1152P-201ENST00000384576 107 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 CRYBB2P1-203ENST00000415709 538 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 RPS27P22-201ENST00000478056 241 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 RNU6-158P-201ENST00000517104 100 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 IGKV3-31-201ENST00000523109 329 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTN4O43707 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTN4O43707 JPX_2.1-201ENST00000614161 69 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 AL110115.1-201ENST00000614396 364 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 MALAT1.1-201ENST00000618249 95 ntBASIC4.39□□□□□ -1.71
ACTN4O43707 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTN4O43707 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
ACTN4O43707 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTN4O43707 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
ACTN4O43707 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.38□□□□□ -1.71
ACTN4O43707 Y_RNA.362-201ENST00000365518 110 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 MIR141-201ENST00000384975 95 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 HMGN2P8-201ENST00000391458 268 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 RPS4XP11-201ENST00000446897 772 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 AC016717.1-201ENST00000448918 286 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 AC011406.1-201ENST00000512440 370 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 RNU6-1149P-201ENST00000516810 97 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 RNA5SP143-201ENST00000516936 115 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTN4O43707 MIR5009-201ENST00000578736 100 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 MIR3690-201ENST00000580266 75 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 VN1R85P-201ENST00000601587 426 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 AC096577.2-201ENST00000611455 153 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTN4O43707 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTN4O43707 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTN4O43707 AC000403.1-201ENST00000613696 3585 ntBASIC4.38□□□□□ -1.71
ACTN4O43707 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTN4O43707 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTN4O43707 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTN4O43707 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTN4O43707 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTN4O43707 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTN4O43707 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTN4O43707 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ACTN4O43707 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ACTN4O43707 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ACTN4O43707 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ACTN4O43707 FAM35DP-201ENST00000323387 2712 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 Y_RNA.198-201ENST00000364013 98 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 RNU6-1134P-201ENST00000365156 101 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 SNORA19.1-201ENST00000410656 129 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 RPL36AP48-201ENST00000485521 314 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 AC093663.1-201ENST00000497190 394 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 AC011604.1-201ENST00000545978 196 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 MIR6758-201ENST00000620653 63 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 MIR492-201ENST00000638676 116 ntBASIC4.37□□□□□ -1.71
ACTN4O43707 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.37□□□□□ -1.71
ACTN4O43707 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.37□□□□□ -1.71
ACTN4O43707 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
ACTN4O43707 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
ACTN4O43707 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACTN4O43707 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.36□□□□□ -1.71
ACTN4O43707 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ACTN4O43707 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.36□□□□□ -1.71
ACTN4O43707 MIR199A2-201ENST00000385289 110 ntBASIC4.36□□□□□ -1.71
ACTN4O43707 MIR1183-201ENST00000408856 89 ntBASIC4.36□□□□□ -1.71
ACTN4O43707 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.36□□□□□ -1.71
ACTN4O43707 RN7SL807P-201ENST00000470923 297 ntBASIC4.36□□□□□ -1.71
ACTN4O43707 AC023141.12-201ENST00000512399 199 ntBASIC4.36□□□□□ -1.71
ACTN4O43707 AC068339.1-201ENST00000526965 141 ntBASIC4.36□□□□□ -1.71
ACTN4O43707 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.35□□□□□ -1.71
ACTN4O43707 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms