Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.96□□□□□ -2.26
RNF13O43567 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RNF13O43567 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.96□□□□□ -2.26
RNF13O43567 CPDP1-201ENST00000579660 283 ntBASIC0.96□□□□□ -2.26
RNF13O43567 MIR4769-201ENST00000584126 77 ntBASIC0.96□□□□□ -2.26
RNF13O43567 MIR5692C1-201ENST00000585309 91 ntBASIC0.96□□□□□ -2.26
RNF13O43567 AC022217.4-201ENST00000604389 163 ntBASIC0.96□□□□□ -2.26
RNF13O43567 AC087752.4-201ENST00000605911 462 ntBASIC0.96□□□□□ -2.26
RNF13O43567 AL357078.3-201ENST00000607528 618 ntBASIC0.96□□□□□ -2.26
RNF13O43567 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.96□□□□□ -2.26
RNF13O43567 AC023510.2-201ENST00000622162 746 ntBASIC0.96□□□□□ -2.26
RNF13O43567 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
RNF13O43567 SNRPEP10-201ENST00000420249 274 ntBASIC0.95□□□□□ -2.26
RNF13O43567 AC010154.1-201ENST00000425857 269 ntBASIC0.95□□□□□ -2.26
RNF13O43567 RAB28P5-201ENST00000427490 651 ntBASIC0.95□□□□□ -2.26
RNF13O43567 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.95□□□□□ -2.26
RNF13O43567 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.95□□□□□ -2.26
RNF13O43567 HMGB1P29-201ENST00000505659 499 ntBASIC0.95□□□□□ -2.26
RNF13O43567 SNORA70.22-201ENST00000517160 124 ntBASIC0.95□□□□□ -2.26
RNF13O43567 MTND1P35-201ENST00000526739 508 ntBASIC0.95□□□□□ -2.26
RNF13O43567 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.95□□□□□ -2.26
RNF13O43567 MIR4760-201ENST00000585040 80 ntBASIC0.95□□□□□ -2.26
RNF13O43567 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
RNF13O43567 MIR8054-201ENST00000620877 86 ntBASIC0.95□□□□□ -2.26
RNF13O43567 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.95□□□□□ -2.26
RNF13O43567 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RNF13O43567 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
RNF13O43567 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RNF13O43567 RNU6-245P-201ENST00000384020 107 ntBASIC0.94□□□□□ -2.26
RNF13O43567 RNY3P9-201ENST00000384727 106 ntBASIC0.94□□□□□ -2.26
RNF13O43567 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
RNF13O43567 AL353193.1-201ENST00000421444 268 ntBASIC0.94□□□□□ -2.26
RNF13O43567 USP9YP29-201ENST00000445112 563 ntBASIC0.94□□□□□ -2.26
RNF13O43567 Y_RNA.654-201ENST00000497848 106 ntBASIC0.94□□□□□ -2.26
RNF13O43567 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.94□□□□□ -2.26
RNF13O43567 SNORA19.2-201ENST00000516013 114 ntBASIC0.94□□□□□ -2.26
RNF13O43567 AC004584.2-201ENST00000570407 410 ntBASIC0.94□□□□□ -2.26
RNF13O43567 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.94□□□□□ -2.26
RNF13O43567 AL513534.2-201ENST00000603836 250 ntBASIC0.94□□□□□ -2.26
RNF13O43567 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
RNF13O43567 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
RNF13O43567 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.94□□□□□ -2.26
RNF13O43567 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.94□□□□□ -2.26
RNF13O43567 AL513423.1-201ENST00000621695 132 ntBASIC0.94□□□□□ -2.26
RNF13O43567 Y_RNA.327-201ENST00000365201 102 ntBASIC0.93□□□□□ -2.26
RNF13O43567 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
RNF13O43567 RNU6-325P-201ENST00000411132 105 ntBASIC0.93□□□□□ -2.26
RNF13O43567 AL606489.2-201ENST00000433886 234 ntBASIC0.93□□□□□ -2.26
RNF13O43567 AC092991.1-201ENST00000477176 376 ntBASIC0.93□□□□□ -2.26
RNF13O43567 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.93□□□□□ -2.26
RNF13O43567 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
RNF13O43567 MTCO1P29-201ENST00000496868 288 ntBASIC0.93□□□□□ -2.26
RNF13O43567 SNORA31.4-201ENST00000516049 129 ntBASIC0.93□□□□□ -2.26
RNF13O43567 RNA5SP54-201ENST00000516951 92 ntBASIC0.93□□□□□ -2.26
RNF13O43567 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.93□□□□□ -2.26
RNF13O43567 AC100830.2-201ENST00000581636 240 ntBASIC0.93□□□□□ -2.26
RNF13O43567 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
RNF13O43567 AC073648.5-201ENST00000603502 305 ntBASIC0.93□□□□□ -2.26
RNF13O43567 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.93□□□□□ -2.26
RNF13O43567 AC091895.1-201ENST00000624494 256 ntBASIC0.93□□□□□ -2.26
RNF13O43567 ZNF204P-201ENST00000416749 2397 ntBASIC0.93□□□□□ -2.26
RNF13O43567 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
RNF13O43567 Y_RNA.1-201ENST00000352915 104 ntBASIC0.92□□□□□ -2.26
RNF13O43567 SNORD115-8-201ENST00000363856 82 ntBASIC0.92□□□□□ -2.26
RNF13O43567 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
RNF13O43567 SNORD115-38-201ENST00000365037 82 ntBASIC0.92□□□□□ -2.26
RNF13O43567 Y_RNA.378-201ENST00000365652 113 ntBASIC0.92□□□□□ -2.26
RNF13O43567 RNU6-38P-201ENST00000384085 107 ntBASIC0.92□□□□□ -2.26
RNF13O43567 RNU6-214P-201ENST00000384130 107 ntBASIC0.92□□□□□ -2.26
RNF13O43567 SNORD37.1-201ENST00000390968 65 ntBASIC0.92□□□□□ -2.26
RNF13O43567 MIR450B-201ENST00000401182 78 ntBASIC0.92□□□□□ -2.26
RNF13O43567 MRPL42P3-201ENST00000401492 326 ntBASIC0.92□□□□□ -2.26
RNF13O43567 RNA5SP504-201ENST00000410676 117 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AL663109.1-201ENST00000411498 844 ntBASIC0.92□□□□□ -2.26
RNF13O43567 RPL23AP75-201ENST00000491601 451 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.92□□□□□ -2.26
RNF13O43567 AC091885.1-201ENST00000506658 268 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AC092436.3-201ENST00000511788 257 ntBASIC0.92□□□□□ -2.26
RNF13O43567 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.92□□□□□ -2.26
RNF13O43567 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.92□□□□□ -2.26
RNF13O43567 AL118558.2-201ENST00000556294 238 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AC145350.1-201ENST00000567426 208 ntBASIC0.92□□□□□ -2.26
RNF13O43567 MIR5695-201ENST00000579717 85 ntBASIC0.92□□□□□ -2.26
RNF13O43567 snoU13.31-201ENST00000607291 104 ntBASIC0.92□□□□□ -2.26
RNF13O43567 SNORD11B-201ENST00000607707 90 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AC007684.1-201ENST00000609671 477 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AL121757.2-201ENST00000611223 313 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AL359757.2-201ENST00000624309 274 ntBASIC0.92□□□□□ -2.26
RNF13O43567 AL133216.2-202ENST00000634512 349 ntBASIC0.92□□□□□ -2.26
RNF13O43567 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RNF13O43567 OR4G1P-203ENST00000641984 1631 ntBASIC0.91□□□□□ -2.26
RNF13O43567 RNU6-505P-201ENST00000384427 107 ntBASIC0.91□□□□□ -2.26
RNF13O43567 MIR521-1-201ENST00000384902 87 ntBASIC0.91□□□□□ -2.26
RNF13O43567 RNU6-440P-201ENST00000390882 105 ntBASIC0.91□□□□□ -2.26
RNF13O43567 AL034345.1-201ENST00000407768 123 ntBASIC0.91□□□□□ -2.26
RNF13O43567 RNU6-1054P-201ENST00000411293 104 ntBASIC0.91□□□□□ -2.26
RNF13O43567 POLR2J4-204ENST00000418424 324 ntBASIC0.91□□□□□ -2.26
RNF13O43567 AC245047.3-201ENST00000429428 127 ntBASIC0.91□□□□□ -2.26
RNF13O43567 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.91□□□□□ -2.26
RNF13O43567 NDUFB4P10-201ENST00000452541 359 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms