Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 RNU6-705P-201ENST00000410601 104 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.73□□□□□ -2.69
NDUFA1O15239 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.73□□□□□ -2.69
NDUFA1O15239 RNU6-856P-201ENST00000516959 98 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 DEFB130C-202ENST00000530001 230 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 SNRPGP1-201ENST00000553864 222 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 AC092608.3-201ENST00000625017 386 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 SEC63P2-201ENST00000503863 1939 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 MIR101-2-201ENST00000362195 79 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 RNU6-188P-201ENST00000364207 107 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 TIMM9P3-201ENST00000428659 274 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 RPL31P54-201ENST00000429803 370 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.74□□□□□ -2.69
NDUFA1O15239 MIR3925-201ENST00000584674 77 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 AL158211.4-201ENST00000606988 584 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 AL118556.2-201ENST00000614375 824 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 AL590396.2-201ENST00000636511 1041 ntBASIC-1.74□□□□□ -2.69
NDUFA1O15239 snoZ40.1-201ENST00000364540 72 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 MIR301A-201ENST00000385261 86 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 SNORA75.1-201ENST00000391130 148 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 DPRXP1-201ENST00000426312 460 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.75□□□□□ -2.69
NDUFA1O15239 AL139286.2-201ENST00000606838 396 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 MIR6507-201ENST00000613630 70 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 AC019226.1-201ENST00000625666 515 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.75□□□□□ -2.69
NDUFA1O15239 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.76□□□□□ -2.69
NDUFA1O15239 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.76□□□□□ -2.69
NDUFA1O15239 RPS24P1-201ENST00000438550 371 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 AC007000.2-201ENST00000442564 487 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.76□□□□□ -2.69
NDUFA1O15239 AP000870.1-201ENST00000472927 406 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 AC090897.1-201ENST00000580909 226 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 AC011451.2-201ENST00000604303 598 ntBASIC-1.76□□□□□ -2.69
NDUFA1O15239 RNU6-440P-201ENST00000390882 105 ntBASIC-1.77□□□□□ -2.69
NDUFA1O15239 AL590002.1-201ENST00000406554 418 ntBASIC-1.77□□□□□ -2.69
NDUFA1O15239 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.77□□□□□ -2.69
NDUFA1O15239 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.77□□□□□ -2.69
NDUFA1O15239 RNA5SP216-201ENST00000516111 123 ntBASIC-1.77□□□□□ -2.69
NDUFA1O15239 RNU6-706P-201ENST00000517229 104 ntBASIC-1.77□□□□□ -2.69
NDUFA1O15239 AC024995.1-201ENST00000523014 93 ntBASIC-1.77□□□□□ -2.69
NDUFA1O15239 AC099786.3-201ENST00000565735 1410 ntBASIC-1.77□□□□□ -2.69
NDUFA1O15239 RNA5SP117-201ENST00000365294 118 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 SNORA12-201ENST00000391162 147 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 RNA5SP95-201ENST00000410319 137 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.78□□□□□ -2.69
NDUFA1O15239 AL139824.2-201ENST00000458731 1095 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.78□□□□□ -2.69
NDUFA1O15239 RNU6-504P-201ENST00000516568 104 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 AC023632.1-201ENST00000518463 375 ntBASIC-1.78□□□□□ -2.69
NDUFA1O15239 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.78□□□□□ -2.69
NDUFA1O15239 AP000568.1-201ENST00000282964 442 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 RNU6-1305P-201ENST00000364353 104 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 RNU6-47P-201ENST00000383866 107 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.79□□□□□ -2.7
NDUFA1O15239 AL365184.2-201ENST00000431139 435 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.79□□□□□ -2.7
NDUFA1O15239 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.79□□□□□ -2.7
NDUFA1O15239 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.79□□□□□ -2.7
NDUFA1O15239 MIR4752-201ENST00000579672 72 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 AL162424.1-201ENST00000602325 221 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 AC022217.4-201ENST00000604389 163 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 RNU1-29P-201ENST00000606574 126 ntBASIC-1.79□□□□□ -2.7
NDUFA1O15239 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 AL592310.1-201ENST00000414330 671 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 TMEM251P1-201ENST00000503717 318 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 AC091304.9-201ENST00000612091 226 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 AL159153.1-201ENST00000619688 317 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 SNORD38B-202ENST00000625943 69 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 AC093726.3-201ENST00000637588 150 ntBASIC-1.8□□□□□ -2.7
NDUFA1O15239 SNORD31B-201ENST00000364977 69 ntBASIC-1.81□□□□□ -2.7
NDUFA1O15239 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.81□□□□□ -2.7
NDUFA1O15239 POLR2KP2-201ENST00000438155 177 ntBASIC-1.81□□□□□ -2.7
NDUFA1O15239 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.81□□□□□ -2.7
NDUFA1O15239 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.81□□□□□ -2.7
NDUFA1O15239 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.81□□□□□ -2.7
NDUFA1O15239 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.81□□□□□ -2.7
NDUFA1O15239 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.81□□□□□ -2.7
NDUFA1O15239 AL359075.3-201ENST00000613288 217 ntBASIC-1.81□□□□□ -2.7
NDUFA1O15239 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.81□□□□□ -2.7
NDUFA1O15239 SNX3P1X-201ENST00000414887 175 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.82□□□□□ -2.7
NDUFA1O15239 SUMO1P2-201ENST00000452524 304 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 AC093850.1-201ENST00000454121 251 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 AC104629.1-201ENST00000494226 508 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 RNA5SP461-201ENST00000516451 104 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 AC140658.3-201ENST00000567603 271 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 AL606834.3-201ENST00000602615 496 ntBASIC-1.82□□□□□ -2.7
NDUFA1O15239 AP000811.1-201ENST00000603803 651 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms