Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 AL121579.1-201ENST00000555129 305 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 RNY1P16-201ENST00000363063 111 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 RNU6-112P-201ENST00000363599 104 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 SNORA75.4-201ENST00000391278 119 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 RNU4-14P-201ENST00000410858 122 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
AP3D1O14617 USP9YP16-201ENST00000430287 407 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.98□□□□□ -2.09
AP3D1O14617 USP9YP23-201ENST00000455085 407 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 Y_RNA.635-201ENST00000459041 101 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 MTND4P17-201ENST00000470444 350 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 UBE2DNL-203ENST00000474922 222 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 AK6P2-201ENST00000549020 471 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 AC005899.2-201ENST00000584353 90 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 AC069114.2-201ENST00000604699 304 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
AP3D1O14617 U2.15-201ENST00000611544 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.16-201ENST00000613119 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.12-201ENST00000613778 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 PISRT1.1-201ENST00000616930 107 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.5-201ENST00000619465 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 U2.10-201ENST00000620268 191 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 snoZ196.1-201ENST00000625269 89 ntBASIC1.98□□□□□ -2.09
AP3D1O14617 RNU6-222P-201ENST00000362438 107 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 Y_RNA.106-201ENST00000363189 100 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 RNU6-700P-201ENST00000391043 107 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
AP3D1O14617 MIR190B-201ENST00000401119 79 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 RNU6-57P-201ENST00000411348 103 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 MTCYBP10-201ENST00000424905 650 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 AC096638.1-201ENST00000444678 216 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 RNU6-221P-201ENST00000459541 99 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 SNORA31.17-201ENST00000516953 127 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 GNAI2P1-201ENST00000541815 315 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.97□□□□□ -2.09
AP3D1O14617 SNRPGP18-201ENST00000553000 214 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.97□□□□□ -2.09
AP3D1O14617 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.97□□□□□ -2.09
AP3D1O14617 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
AP3D1O14617 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 AC116312.1-201ENST00000606841 314 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 AL355073.2-201ENST00000612106 557 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 MIR338-201ENST00000636369 67 ntBASIC1.97□□□□□ -2.09
AP3D1O14617 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
AP3D1O14617 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
AP3D1O14617 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
AP3D1O14617 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
AP3D1O14617 U3.8-201ENST00000363675 217 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 Y_RNA.179-201ENST00000363844 90 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 RNU1-96P-201ENST00000364163 162 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 SNORD87-201ENST00000364849 89 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 Y_RNA.415-201ENST00000384012 112 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 RNU6-281P-201ENST00000384212 103 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 RNU6-331P-201ENST00000384724 107 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 MIR548B-201ENST00000385247 97 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AC245047.4-201ENST00000433189 144 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.96□□□□□ -2.1
AP3D1O14617 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.96□□□□□ -2.1
AP3D1O14617 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.96□□□□□ -2.1
AP3D1O14617 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AC008413.1-201ENST00000511864 177 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 RNU6-307P-201ENST00000516743 106 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.96□□□□□ -2.1
AP3D1O14617 MIR5695-201ENST00000579717 85 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AC016727.1-205ENST00000605437 569 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AC010999.1-201ENST00000611856 324 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AC126177.8-201ENST00000618339 1015 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.96□□□□□ -2.1
AP3D1O14617 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 AL669831.3-213ENST00000636676 183 ntBASIC1.96□□□□□ -2.1
AP3D1O14617 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
AP3D1O14617 MTND5P16-201ENST00000460269 1703 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 RNU6-874P-201ENST00000362390 105 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 snoU2-30.2-201ENST00000362805 70 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 RNU6-727P-201ENST00000363592 107 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 RNU6-1019P-201ENST00000364424 107 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 Y_RNA.364-201ENST00000365532 101 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 Y_RNA.474-201ENST00000384341 102 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
AP3D1O14617 AC016909.1-201ENST00000415916 166 ntBASIC1.95□□□□□ -2.1
AP3D1O14617 AL353997.1-201ENST00000432936 108 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms