Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL442163.3-201ENST00000554110 156 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 MIR548AI-201ENST00000579940 88 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM38O00635 AC060766.3-201ENST00000591442 263 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 RPL30P11-203ENST00000598995 310 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM38O00635 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM38O00635 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.85□□□□□ -1.95
TRIM38O00635 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM38O00635 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM38O00635 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM38O00635 RNU4-56P-201ENST00000364700 142 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 RNU6-47P-201ENST00000383866 107 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 Y_RNA.439-201ENST00000384119 94 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 Y_RNA.602-201ENST00000410535 92 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AL445305.1-201ENST00000432577 575 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AC087499.2-201ENST00000432861 149 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM38O00635 AC079354.2-201ENST00000453523 154 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 CYP2C59P-201ENST00000457790 269 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 U8.22-201ENST00000459141 133 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AC073901.1-201ENST00000462471 408 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 RPL30P10-201ENST00000488148 337 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 RNU5F-2P-201ENST00000516066 82 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 RNU6-1278P-201ENST00000516130 107 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 RNU6-567P-201ENST00000516746 107 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM38O00635 MIR5571-201ENST00000577998 113 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AL034555.1-201ENST00000604816 211 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AL670379.2-201ENST00000604983 252 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AC004832.4-201ENST00000608952 331 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 AC009318.2-201ENST00000610917 651 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 MIR5739-201ENST00000619803 80 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 SNORA43.4-201ENST00000629559 138 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 SNORD98-201ENST00000636377 67 ntBASIC2.84□□□□□ -1.95
TRIM38O00635 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM38O00635 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM38O00635 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM38O00635 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TRIM38O00635 RNU6-704P-201ENST00000364162 103 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 U3.13-201ENST00000364804 214 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 Y_RNA.358-201ENST00000365491 99 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 MIR29B2-201ENST00000385055 81 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TRIM38O00635 AL079342.1-201ENST00000401460 267 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 RN7SKP51-201ENST00000410781 304 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 AC003685.2-201ENST00000422795 395 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM38O00635 RPL39P40-201ENST00000445481 146 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM38O00635 RPS3P1-201ENST00000456781 192 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 AC091874.1-201ENST00000511402 339 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 MTND5P41-201ENST00000517498 206 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 MZT1P2-201ENST00000604387 248 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 AL359198.2-201ENST00000611836 194 ntBASIC2.83□□□□□ -1.96
TRIM38O00635 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM38O00635 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM38O00635 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM38O00635 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM38O00635 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM38O00635 Y_RNA.123-201ENST00000363338 102 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RNY1P5-201ENST00000383890 115 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RNU6-937P-201ENST00000384325 106 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RNY3P4-201ENST00000384428 101 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 MIR95-201ENST00000385072 81 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 MIR190B-201ENST00000401119 79 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RNU2-63P-201ENST00000410792 194 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 Y_RNA.626-201ENST00000411288 95 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM38O00635 AC063976.3-201ENST00000426849 329 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 GPM6BP3-201ENST00000442797 145 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 SNRPGP7-201ENST00000469016 106 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RN7SL297P-201ENST00000483161 293 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 AC140059.1-201ENST00000489238 361 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 RNU6-496P-201ENST00000516145 99 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 AC090115.4-201ENST00000609970 188 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 AC013412.1-201ENST00000610687 192 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 AL590240.4-201ENST00000616908 390 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 AC243829.7-201ENST00000633081 225 ntBASIC2.82□□□□□ -1.96
TRIM38O00635 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM38O00635 AC135776.4-201ENST00000624300 1904 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
TRIM38O00635 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM38O00635 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM38O00635 RNU4-82P-201ENST00000362443 140 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 SNORD113-8-201ENST00000363497 74 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 RNU6-1286P-201ENST00000383871 107 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 Y_RNA.504-201ENST00000384481 104 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 MIR613-201ENST00000385248 95 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 RN7SKP284-201ENST00000411002 343 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 AC019205.3-201ENST00000424573 156 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 AC016700.2-201ENST00000446011 156 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM38O00635 HSPE1P25-201ENST00000455484 251 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 RNU7-200P-201ENST00000516105 62 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms