Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC137590.2-201ENST00000619709 240 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 snoZ196.1-201ENST00000625269 89 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UPK1AO00322 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UPK1AO00322 RNU6-82P-201ENST00000363970 107 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 RNU6-1329P-201ENST00000365664 107 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 MIR521-1-201ENST00000384902 87 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
UPK1AO00322 RN7SKP200-201ENST00000410564 320 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AC010154.1-201ENST00000425857 269 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AL031667.1-201ENST00000440222 725 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AC007215.1-201ENST00000464893 276 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK1AO00322 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 CYCSP23-201ENST00000519781 313 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.8□□□□□ -2.28
UPK1AO00322 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK1AO00322 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK1AO00322 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AL022345.2-201ENST00000606307 135 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AC021506.2-201ENST00000612354 169 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 AL359075.3-201ENST00000613288 217 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.8□□□□□ -2.28
UPK1AO00322 OR5AK4P-201ENST00000635912 903 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 MIR6767-201ENST00000637302 66 ntBASIC0.8□□□□□ -2.28
UPK1AO00322 Y_RNA.296-201ENST00000364930 108 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNU6-1240P-201ENST00000365155 104 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNU4-66P-201ENST00000365199 138 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNU6-214P-201ENST00000384130 107 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNU6-1158P-201ENST00000391167 107 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 MRPS10P2-201ENST00000431226 381 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1AO00322 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1AO00322 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1AO00322 RNA5SP401-201ENST00000515920 127 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNU6-1038P-201ENST00000516516 104 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNU6-113P-201ENST00000516653 101 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 MTND1P35-201ENST00000526739 508 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.79□□□□□ -2.28
UPK1AO00322 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
UPK1AO00322 AL157687.1-201ENST00000554853 619 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1AO00322 AC136932.1-201ENST00000574771 208 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 MIR4528-201ENST00000577763 90 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 MIR4742-201ENST00000581069 85 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 AC007684.1-201ENST00000609671 477 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 AC103705.1-201ENST00000619013 241 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 SCARNA4-201ENST00000629045 128 ntBASIC0.79□□□□□ -2.28
UPK1AO00322 ZNF204P-201ENST00000416749 2397 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
UPK1AO00322 MIR373-201ENST00000362273 69 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 Y_RNA.381-201ENST00000365666 102 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 RNU6-1031P-201ENST00000384773 107 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
UPK1AO00322 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 AC004866.1-201ENST00000411748 78 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK1AO00322 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK1AO00322 RPL39P38-201ENST00000467018 153 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 SNORA19.2-201ENST00000516013 114 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 MIR4424-201ENST00000585257 86 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 AC073114.1-201ENST00000612027 490 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 AC012676.2-201ENST00000619258 186 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 Z69908.1-201ENST00000622603 247 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 AC027335.2-201ENST00000624030 375 ntBASIC0.78□□□□□ -2.28
UPK1AO00322 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK1AO00322 Y_RNA.1-201ENST00000352915 104 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 RNU1-124P-201ENST00000363861 145 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 RNU6-348P-201ENST00000384386 107 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UPK1AO00322 RNU6-325P-201ENST00000411132 105 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 TIMM9P3-201ENST00000428659 274 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AL606489.2-201ENST00000433886 234 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK1AO00322 AL359672.1-201ENST00000442302 409 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 USP9YP29-201ENST00000445112 563 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 RPS3AP17-201ENST00000472594 777 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AF186996.7-201ENST00000492781 209 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK1AO00322 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 SNORD116-28-201ENST00000516123 91 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 RNU6-344P-201ENST00000516635 111 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 Y_RNA.695-201ENST00000516715 107 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 SNORA70.22-201ENST00000517160 124 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AC025647.1-201ENST00000517879 253 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 TPRKBP2-201ENST00000565969 475 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AC145350.1-201ENST00000567426 208 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 SNORD11B-201ENST00000607707 90 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AL121757.2-201ENST00000611223 313 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 MIR8076-201ENST00000611401 83 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AC139792.3-201ENST00000623525 224 ntBASIC0.77□□□□□ -2.29
UPK1AO00322 AC008873.1-201ENST00000625051 138 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms