Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SNORD115-8-201ENST00000363856 82 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 SNORD115-38-201ENST00000365037 82 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 RNU6-245P-201ENST00000384020 107 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 MIR221-201ENST00000385135 110 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 AL512604.1-201ENST00000404812 257 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 WARS2P1-201ENST00000429678 537 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.79□□□□□ -2.12
SRRM4A7MD48 snoU13.6-201ENST00000458785 104 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 RPL17P19-201ENST00000489069 552 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 AF186996.7-201ENST00000492781 209 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 AC105758.1-201ENST00000506038 399 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 RNU6-1137P-201ENST00000517073 99 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 SNORD116.3-201ENST00000517176 78 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 SUB1P3-201ENST00000564581 315 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 AL162730.1-201ENST00000605734 292 ntBASIC1.79□□□□□ -2.12
SRRM4A7MD48 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.79□□□□□ -2.12
SRRM4A7MD48 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.79□□□□□ -2.12
SRRM4A7MD48 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.79□□□□□ -2.12
SRRM4A7MD48 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.79□□□□□ -2.12
SRRM4A7MD48 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SRRM4A7MD48 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SRRM4A7MD48 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNY1P16-201ENST00000363063 111 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 SNORD115-3-201ENST00000363100 82 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNU6-99P-201ENST00000364721 107 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 Y_RNA.364-201ENST00000365532 101 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 Y_RNA.428-201ENST00000384078 102 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNU11-3P-201ENST00000391111 133 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 MRPL42P3-201ENST00000401492 326 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AL158823.1-201ENST00000418441 478 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AC027124.2-201ENST00000428249 105 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 snoU13.30-201ENST00000458951 104 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNA5SP233-201ENST00000459153 113 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNU7-175P-201ENST00000515915 61 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 MIR449C-201ENST00000516047 92 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNU6-1098P-201ENST00000516772 96 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 RNU2-44P-201ENST00000516795 194 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 MIR5696-201ENST00000578474 85 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 MIR4672-201ENST00000583126 81 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AC025754.2-201ENST00000606491 432 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 AC009831.4-201ENST00000620744 325 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 MIR6852-201ENST00000621699 66 ntBASIC1.78□□□□□ -2.12
SRRM4A7MD48 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SRRM4A7MD48 ZNF299P-201ENST00000406845 1804 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRRM4A7MD48 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRRM4A7MD48 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SRRM4A7MD48 RNU6-23P-201ENST00000363283 107 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 Y_RNA.145-201ENST00000363527 102 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 SNORA18.2-201ENST00000383865 132 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 SNORA11.2-201ENST00000408318 127 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 RNA5SP450-201ENST00000411206 102 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.77□□□□□ -2.13
SRRM4A7MD48 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SRRM4A7MD48 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.77□□□□□ -2.13
SRRM4A7MD48 AC099799.1-201ENST00000439809 192 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.77□□□□□ -2.13
SRRM4A7MD48 AC009237.7-201ENST00000447357 229 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 AC016925.1-201ENST00000458303 298 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 SNORA25.10-201ENST00000515926 124 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 RNU6-1046P-201ENST00000516538 107 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 MIR4680-201ENST00000580906 66 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 MIR5006-201ENST00000583027 110 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 MIR4753-201ENST00000585119 83 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 AC008737.2-201ENST00000599446 118 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 AC092447.9-201ENST00000603395 144 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 MTND5P6-201ENST00000422338 1798 ntBASIC1.77□□□□□ -2.13
SRRM4A7MD48 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRRM4A7MD48 Y_RNA.158-201ENST00000363651 101 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 RNU6-1164P-201ENST00000364428 107 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 Y_RNA.314-201ENST00000365114 102 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 RNU1-115P-201ENST00000365329 160 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 RNA5SP37-201ENST00000365420 130 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 AC117470.1-201ENST00000381974 330 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 Y_RNA.577-201ENST00000384794 101 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 MIR144-201ENST00000384886 86 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 RNA5SP212-201ENST00000391223 107 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 RNU6-1156P-201ENST00000410365 100 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 AC004386.2-201ENST00000441858 148 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 CHEK2P4-201ENST00000450340 246 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
SRRM4A7MD48 TOMM22P6-201ENST00000465035 409 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 UBE2DNL-203ENST00000474922 222 ntBASIC1.76□□□□□ -2.13
SRRM4A7MD48 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SRRM4A7MD48 AL590705.4-201ENST00000532209 134 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms