Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MIR6852-201ENST00000621699 66 ntBASIC4.09□□□□□ -1.75
USP17L3A6NCW0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.09□□□□□ -1.75
USP17L3A6NCW0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.09□□□□□ -1.76
USP17L3A6NCW0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 AC009414.1-201ENST00000427200 443 ntBASIC4.08□□□□□ -1.76
USP17L3A6NCW0 HSPE1P21-201ENST00000438283 308 ntBASIC4.08□□□□□ -1.76
USP17L3A6NCW0 RNU7-57P-201ENST00000459540 60 ntBASIC4.08□□□□□ -1.76
USP17L3A6NCW0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.08□□□□□ -1.76
USP17L3A6NCW0 MIR4724-201ENST00000579485 89 ntBASIC4.08□□□□□ -1.76
USP17L3A6NCW0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.08□□□□□ -1.76
USP17L3A6NCW0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 RNU6-271P-201ENST00000363858 105 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 RNU6-22P-201ENST00000384355 107 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AL139095.1-201ENST00000404326 391 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 RPL23AP48-201ENST00000406913 488 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AC006989.1-201ENST00000427212 131 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 RPL23AP7-203ENST00000449021 469 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 CENPBD1P1-201ENST00000464061 469 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AC083906.5-201ENST00000503722 328 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 RNU6-479P-201ENST00000516348 105 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AC026333.2-201ENST00000542164 106 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 MIR548X2-201ENST00000579776 100 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 LARP7P3-201ENST00000579888 337 ntBASIC4.07□□□□□ -1.76
USP17L3A6NCW0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.07□□□□□ -1.76
USP17L3A6NCW0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.06□□□□□ -1.76
USP17L3A6NCW0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP17L3A6NCW0 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 MIR569-201ENST00000385228 96 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 Y_RNA.586-201ENST00000391146 98 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 HSPE1P13-201ENST00000451143 297 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.06□□□□□ -1.76
USP17L3A6NCW0 SNORD59.2-201ENST00000516873 68 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 DNAJC19P2-201ENST00000593340 302 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.06□□□□□ -1.76
USP17L3A6NCW0 MIR548AY-201ENST00000617669 107 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 UCA1.1-201ENST00000620952 75 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 snoZ196.1-201ENST00000625269 89 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 AC110079.1-202ENST00000635213 138 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP17L3A6NCW0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP17L3A6NCW0 CEP170P1-201ENST00000502249 4587 ntBASIC4.06□□□□□ -1.76
USP17L3A6NCW0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC068647.1-201ENST00000489539 2265 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 Y_RNA.124-201ENST00000363339 93 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 RNA5SP139-201ENST00000364340 117 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 RNU6-234P-201ENST00000365229 104 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 RNU6-1274P-201ENST00000384557 107 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 Y_RNA.572-201ENST00000384757 98 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC245047.8-201ENST00000456455 284 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 MRPS36P2-201ENST00000512569 299 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 MIR449C-201ENST00000516047 92 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 SCARNA17.1-201ENST00000516211 143 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 RNU6-313P-201ENST00000516317 112 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 SCARNA17.2-201ENST00000516334 143 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 SCARNA11.3-201ENST00000517276 130 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC022616.8-201ENST00000533569 253 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 MIR4513-201ENST00000581077 86 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 SCARNA17.4-201ENST00000614296 143 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC006386.2-201ENST00000624491 75 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 AC012005.1-201ENST00000624575 75 ntBASIC4.05□□□□□ -1.76
USP17L3A6NCW0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
USP17L3A6NCW0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 Y_RNA.337-201ENST00000365312 102 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 514.7 ms