Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 RNU6-567P-201ENST00000516746 107 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 RNU1-92P-201ENST00000517017 135 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 AC005520.5-201ENST00000613926 164 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 AL590240.4-201ENST00000616908 390 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 MIR340-201ENST00000362125 95 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 RNU6-510P-201ENST00000391239 108 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 SRIP3-201ENST00000413200 219 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 RPS3AP52-201ENST00000435639 297 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 AC004386.2-201ENST00000441858 148 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 AL035666.1-201ENST00000446195 348 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 MTCO3P8-201ENST00000453691 755 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 MIR4285-201ENST00000581001 85 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 MIR4273-201ENST00000582824 84 ntBASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.41□□□□□ -2.18
NKX2-6A6NCS4 MTND5P9-201ENST00000503854 1755 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RNU6-438P-201ENST00000365561 103 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AL357139.1-201ENST00000407792 426 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 MIR548K-201ENST00000408406 116 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RNU6-174P-201ENST00000410406 106 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RNU4-14P-201ENST00000410858 122 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RN7SKP101-201ENST00000411376 320 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 PDCL2P1-201ENST00000419302 352 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AC139712.2-201ENST00000424302 339 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RPL30P10-201ENST00000488148 337 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RPS23P5-201ENST00000495419 428 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AC103851.1-201ENST00000506833 274 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RNU1-54P-201ENST00000517181 120 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 MIR5006-201ENST00000583027 110 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 ZNF204P-201ENST00000416749 2397 ntBASIC1.4□□□□□ -2.19
NKX2-6A6NCS4 RNA5SP493-201ENST00000364115 91 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 RNU6-1283P-201ENST00000365314 105 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 RNU6-418P-201ENST00000384035 107 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 RNU6-767P-201ENST00000384132 107 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 MTCO3P46-201ENST00000425787 232 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 MTCO3P29-201ENST00000432119 779 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 RBMX2P4-201ENST00000441256 376 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 DAP3P1-201ENST00000441522 278 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 AC026782.1-201ENST00000512952 449 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.670-201ENST00000516255 105 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 CBX3P8-201ENST00000532412 525 ntBASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.39□□□□□ -2.19
NKX2-6A6NCS4 RNU1-58P-201ENST00000362413 163 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 RNU6-845P-201ENST00000362578 103 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.72-201ENST00000362894 103 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 RNU1-76P-201ENST00000362903 159 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.279-201ENST00000364763 95 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.339-201ENST00000365325 102 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 RNU6-331P-201ENST00000384724 107 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AL139396.1-201ENST00000421137 167 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AC016717.1-201ENST00000448918 286 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 RPL7P42-201ENST00000481005 679 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AC016256.1-201ENST00000547971 354 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 UBL5P4-201ENST00000562584 236 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AL022345.1-201ENST00000607292 135 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AC005562.2-201ENST00000618264 111 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 AC130454.1-201ENST00000622948 401 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 SCARNA4-201ENST00000629045 128 ntBASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.2-201ENST00000362330 96 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms