Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL606662.1-201ENST00000445763 553 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RPL39P39-201ENST00000455840 151 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC245047.8-201ENST00000456455 284 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORA68.3-201ENST00000515906 83 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIR5006-201ENST00000583027 110 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL357312.1-201ENST00000603879 298 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL359999.1-201ENST00000604513 294 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL031667.3-201ENST00000620124 655 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC138649.3-201ENST00000622154 254 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC011155.2-201ENST00000623202 216 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL359697.1-201ENST00000624879 587 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AP000568.1-201ENST00000282964 442 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 Y_RNA.18-201ENST00000362461 102 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-636P-201ENST00000384598 107 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MRPL42P2-201ENST00000403169 426 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC009237.7-201ENST00000447357 229 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 EXOSC3P1-201ENST00000448649 500 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORA25.17-201ENST00000517184 124 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC027419.1-201ENST00000522976 328 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL096861.1-201ENST00000610899 123 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL391903.3-201ENST00000612158 163 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL138726.1-201ENST00000614873 333 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 TCL6_2.1-201ENST00000615162 119 ntBASIC0.19□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU5F-6P-201ENST00000362979 116 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNA5SP457-201ENST00000363657 124 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-83P-201ENST00000384568 112 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIR586-201ENST00000385035 97 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL356583.2-201ENST00000426536 280 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU7-57P-201ENST00000459540 60 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RN7SKP12-201ENST00000516275 143 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC025647.1-201ENST00000517879 253 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC026470.2-201ENST00000561492 181 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC004584.2-201ENST00000570407 410 ntBASIC0.18□□□□□ -2.38
TCRBV4S1A1TA0A5B7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORA2.2-201ENST00000365473 135 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNY1P8-201ENST00000383970 114 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORD89-201ENST00000390981 114 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC244098.3-201ENST00000424803 96 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MTCO2P23-201ENST00000425216 680 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MTCO3P8-201ENST00000453691 755 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC022364.2-201ENST00000457963 554 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 U7.7-201ENST00000459276 60 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MTND5P16-201ENST00000460269 1703 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC025627.3-201ENST00000582078 182 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 Z83818.1-201ENST00000603584 150 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC002044.1-201ENST00000606707 158 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC004832.4-201ENST00000608952 331 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC138749.5-201ENST00000611461 208 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 7SK.10-201ENST00000621414 298 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC022418.1-201ENST00000624118 445 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC099654.13-201ENST00000639774 207 ntBASIC0.17□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MTND5P17-201ENST00000418405 1603 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIRLET7D-201ENST00000362263 87 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-1287P-201ENST00000362914 107 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-169P-201ENST00000365336 107 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 Y_RNA.367-201ENST00000365544 101 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-1060P-201ENST00000384664 107 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RPS3AP3-201ENST00000411933 242 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 STAG3L5P-204ENST00000443759 179 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC022493.2-201ENST00000506122 481 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SUB1P2-201ENST00000556401 297 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC131055.1-201ENST00000584626 316 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC018714.1-201ENST00000605028 208 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL109933.3-201ENST00000619095 188 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 snoZ196.1-201ENST00000625269 89 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC100810.6-201ENST00000638068 285 ntBASIC0.16□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORA20.2-201ENST00000383922 131 ntBASIC0.15□□□□□ -2.39
TCRBV4S1A1TA0A5B7 SNORA67.2-201ENST00000384300 149 ntBASIC0.15□□□□□ -2.39
TCRBV4S1A1TA0A5B7 Y_RNA.480-201ENST00000384364 102 ntBASIC0.15□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNA5SP127-201ENST00000411051 133 ntBASIC0.15□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AL354692.1-201ENST00000423044 315 ntBASIC0.15□□□□□ -2.39
TCRBV4S1A1TA0A5B7 CALM2P4-201ENST00000430810 426 ntBASIC0.15□□□□□ -2.39
TCRBV4S1A1TA0A5B7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms