Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 AC005176.2-201ENST00000596933 147 ntBASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 RPL30P11-203ENST00000598995 310 ntBASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 SCARNA17.4-201ENST00000614296 143 ntBASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 TCL6_2.1-201ENST00000615162 119 ntBASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 AC005562.2-201ENST00000618264 111 ntBASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 AC002064.3-201ENST00000623448 346 ntBASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TCRBV5S1A1TA0A578 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 Y_RNA.16-201ENST00000362421 102 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 Y_RNA.20-201ENST00000362479 113 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 Y_RNA.352-201ENST00000365439 102 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 RNU6-102P-201ENST00000384485 104 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 Y_RNA.570-201ENST00000384750 101 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 SNORA46.1-201ENST00000391069 153 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 RPL23AP36-201ENST00000413895 458 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 HSPE1P25-201ENST00000455484 251 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 SCARNA24.2-201ENST00000516968 130 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 HSPE1P18-201ENST00000517602 280 ntBASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TCRBV5S1A1TA0A578 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -2
TCRBV5S1A1TA0A578 RNU6-727P-201ENST00000363592 107 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 RNA5SP68-201ENST00000363885 119 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 SNORA72.2-201ENST00000365028 127 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 RNU6-1175P-201ENST00000365200 107 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 RNU6-1310P-201ENST00000384153 107 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 Y_RNA.515-201ENST00000384535 112 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 SNORA53-201ENST00000391141 249 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 RNU4-30P-201ENST00000410245 143 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 AC004386.2-201ENST00000441858 148 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 IFNA11P-201ENST00000446352 526 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 RPL17P51-201ENST00000605218 238 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.58□□□□□ -2
TCRBV5S1A1TA0A578 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 SNORD27-201ENST00000363981 72 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 RNU6-326P-201ENST00000365480 107 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 SNORA18.2-201ENST00000383865 132 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 MIR29B2-201ENST00000385055 81 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 NDUFB4P4-201ENST00000404822 243 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 ELOCP21-201ENST00000412558 336 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 AC009963.1-201ENST00000417265 157 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 SERF1AP1-201ENST00000514575 187 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 RNU6-344P-201ENST00000516635 111 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 RNU2-44P-201ENST00000516795 194 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 RNU6-111P-201ENST00000517179 105 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 MIR5006-201ENST00000583027 110 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 AC037487.3-201ENST00000606668 112 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 MIR6817-201ENST00000615588 66 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.57□□□□□ -2
TCRBV5S1A1TA0A578 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AC103988.1-201ENST00000566382 2177 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 Y_RNA.54-201ENST00000362766 105 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 Y_RNA.286-201ENST00000364813 102 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 Y_RNA.569-201ENST00000384749 103 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AL603910.2-201ENST00000407268 136 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 Z98949.2-201ENST00000440996 144 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AC009237.7-201ENST00000447357 229 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 HMGB3P17-201ENST00000504195 649 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 RNA5SP148-201ENST00000516527 94 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 RNU2-31P-201ENST00000516954 155 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AC109329.2-201ENST00000519658 482 ntBASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.56□□□□□ -2
TCRBV5S1A1TA0A578 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms