Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RNU6-440P-201ENST00000390882 105 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 SNORA26.8-201ENST00000391306 124 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC016909.1-201ENST00000415916 166 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 RNU7-94P-201ENST00000459576 63 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-189P-201ENST00000516120 101 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC060788.1-201ENST00000521318 469 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC025423.5-201ENST00000550230 219 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 SCOCP1-201ENST00000554676 349 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AL390123.1-201ENST00000603216 237 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AL136370.1-201ENST00000608166 691 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC064836.2-201ENST00000609491 462 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 RMST_3.1-201ENST00000611651 109 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 AC073349.3-201ENST00000617616 186 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 FER-210ENST00000628534 558 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 RNU5A-6P-201ENST00000384136 116 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-505P-201ENST00000384427 107 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AL358934.1-201ENST00000432346 324 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 MTCO3P38-201ENST00000468910 766 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 HMGN1P7-201ENST00000491722 313 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AC105758.1-201ENST00000506038 399 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 RNA5SP54-201ENST00000516951 92 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 RNU1-117P-201ENST00000517041 158 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AL137100.2-201ENST00000555786 315 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 MIR5695-201ENST00000579717 85 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AC106754.2-201ENST00000623006 233 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 AC139792.3-201ENST00000623525 224 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 OR5AK4P-201ENST00000635912 903 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 U6.108-201ENST00000637764 58 ntBASIC0.8□□□□□ -2.28
TRAV25A0A0B4J276 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-82P-201ENST00000363970 107 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-53P-201ENST00000365367 106 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-1329P-201ENST00000365664 107 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-1186P-201ENST00000410429 97 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AC245047.7-201ENST00000440265 293 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AC073415.1-201ENST00000449240 153 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 MTCO2P18-201ENST00000457151 658 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AC048334.1-201ENST00000477975 159 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 HMGB1P29-201ENST00000505659 499 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 RNA5SP168-201ENST00000516642 112 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 MTCO2P4-201ENST00000517968 247 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AC104576.1-201ENST00000524225 88 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 MTND1P35-201ENST00000526739 508 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AC093424.1-201ENST00000604999 338 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AC103810.9-201ENST00000606688 112 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 SNORD11B-201ENST00000607707 90 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 AL603755.1-201ENST00000619504 163 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 ZNF204P-201ENST00000416749 2397 ntBASIC0.79□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-1266P-201ENST00000362794 105 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 SNORA67.2-201ENST00000384300 149 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 MIR660-201ENST00000385235 97 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 COX6CP14-201ENST00000469580 174 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 CCDC34P1-201ENST00000507441 517 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 RN7SKP49-201ENST00000516675 260 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-430P-201ENST00000517078 107 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AC007834.2-201ENST00000536310 343 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AC087683.1-201ENST00000591187 441 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AC022432.1-201ENST00000595739 310 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AL354950.2-201ENST00000617939 290 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 AC091931.1-201ENST00000623488 728 ntBASIC0.78□□□□□ -2.28
TRAV25A0A0B4J276 OR4G1P-203ENST00000641984 1631 ntBASIC0.78□□□□□ -2.29
TRAV25A0A0B4J276 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 Y_RNA.159-201ENST00000363674 87 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 RNU6-933P-201ENST00000384424 107 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 AL049545.1-201ENST00000401856 572 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 AC002429.1-201ENST00000437672 148 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 RPL39P39-201ENST00000455840 151 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 TPTE2P5-203ENST00000458118 728 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 BET1P1-201ENST00000482276 359 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 RNU6-322P-201ENST00000516010 103 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 SNORD79.1-201ENST00000516069 84 ntBASIC0.77□□□□□ -2.29
TRAV25A0A0B4J276 RN7SKP287-201ENST00000516546 266 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms