Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SNORA72.3-201ENST00000365074 132 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-1240P-201ENST00000365155 104 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-996P-201ENST00000365438 107 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-505P-201ENST00000384427 107 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC008134.1-201ENST00000420943 193 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AL031667.1-201ENST00000440222 725 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-221P-201ENST00000459541 99 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SRRM1P2-201ENST00000464531 1192 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC048334.1-201ENST00000477975 159 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SCOCP1-201ENST00000554676 349 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MIR4424-201ENST00000585257 86 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MIR6857-201ENST00000613267 93 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC068792.1-201ENST00000621354 417 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SCARNA4-201ENST00000629045 128 ntBASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SNORA12.1-201ENST00000390873 148 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SNORD12-201ENST00000391002 90 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MIR320B2-201ENST00000408479 138 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC245047.3-201ENST00000429428 127 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC005002.2-201ENST00000438228 269 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-344P-201ENST00000516635 111 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNA5SP168-201ENST00000516642 112 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-922P-201ENST00000516753 99 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-430P-201ENST00000517078 107 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC087854.1-201ENST00000519706 414 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC104576.1-201ENST00000524225 88 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MIR3908-201ENST00000579798 126 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC013244.2-201ENST00000603396 103 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AL513423.1-201ENST00000621695 132 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 FER-210ENST00000628534 558 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 OR5AK4P-201ENST00000635912 903 ntBASIC0.67□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU4-38P-201ENST00000364472 129 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-53P-201ENST00000365367 106 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-1329P-201ENST00000365664 107 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-440P-201ENST00000390882 105 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MRPL42P3-201ENST00000401492 326 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AL606923.1-201ENST00000406616 190 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC114482.1-201ENST00000418010 247 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC063976.4-201ENST00000421971 163 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MTCO2P18-201ENST00000457151 658 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SNORD124-201ENST00000459577 104 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC105758.1-201ENST00000506038 399 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC103851.1-201ENST00000506833 274 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-189P-201ENST00000516120 101 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU6-415P-201ENST00000516252 97 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RN7SKP287-201ENST00000516546 266 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNU7-128P-201ENST00000517247 62 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 MTCO2P4-201ENST00000517968 247 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 Z94722.1-201ENST00000604328 474 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC093424.1-201ENST00000604999 338 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC109347.2-201ENST00000610220 349 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 AC106754.2-201ENST00000623006 233 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SNORD3E-202ENST00000627253 216 ntBASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV8-3A0A0A6YYJ7 SNORD114-24-201ENST00000365029 72 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AL034345.1-201ENST00000407768 123 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC002429.1-201ENST00000437672 148 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AL445567.1-201ENST00000439121 144 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC245047.7-201ENST00000440265 293 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 MTND1P27-201ENST00000451117 902 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 HMGB1P29-201ENST00000505659 499 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 SNORD79.1-201ENST00000516069 84 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC025423.5-201ENST00000550230 219 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC004584.2-201ENST00000570407 410 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC004223.2-201ENST00000590309 544 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC103705.1-201ENST00000619013 241 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 ZNF204P-201ENST00000416749 2397 ntBASIC0.65□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 RNU4-76P-201ENST00000364509 141 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 MIR660-201ENST00000385235 97 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 MIR450B-201ENST00000401182 78 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AL049545.1-201ENST00000401856 572 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 RNA5SP504-201ENST00000410676 117 ntBASIC0.64□□□□□ -2.31
TRAV8-3A0A0A6YYJ7 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms