Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC107393.1-201ENST00000512403 346 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 AC027176.1-201ENST00000560204 514 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 CYP4A27P-201ENST00000567218 190 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 MIR3923-201ENST00000579521 83 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 U2.14-201ENST00000615943 113 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 AC132825.6-201ENST00000638861 357 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 AC080128.1-201ENST00000474389 1917 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 MIR411-201ENST00000362239 96 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.83-201ENST00000363005 113 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.439-201ENST00000384119 94 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 RNU6-378P-201ENST00000384324 107 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 RNU6-102P-201ENST00000384485 104 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 RNU2-52P-201ENST00000410680 190 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 EIF1P2-201ENST00000428233 350 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 AL445305.1-201ENST00000432577 575 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 RPS3P1-201ENST00000456781 192 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 snoU13.6-201ENST00000458785 104 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 RNU6-496P-201ENST00000516145 99 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1012P-201ENST00000516606 109 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 AC091144.1-201ENST00000519573 138 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 MIR3117-201ENST00000584034 78 ntBASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC187A0A096LP49 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.54-201ENST00000362766 105 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 U8.10-201ENST00000384260 133 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 MIR9-1-201ENST00000385198 89 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AL079342.1-201ENST00000401460 267 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 BMS1P22-201ENST00000414726 313 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 HSPE1P25-201ENST00000455484 251 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 ANXA2P1-201ENST00000505539 926 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 RNU6-1198P-201ENST00000516904 67 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AL356280.1-201ENST00000603614 379 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AL138963.2-201ENST00000605137 226 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AC011921.3-201ENST00000605540 361 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 AC005520.5-201ENST00000613926 164 ntBASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CCDC187A0A096LP49 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.143-201ENST00000363520 106 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 RNU6-137P-201ENST00000363680 108 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.358-201ENST00000365491 99 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 U6atac.2-201ENST00000408644 118 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.793-201ENST00000411222 111 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 AL606753.1-201ENST00000427435 87 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 AL445687.1-201ENST00000439946 251 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 RNU7-87P-201ENST00000459343 62 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 RN7SL75P-201ENST00000461926 281 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 AC074198.2-201ENST00000508153 258 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 SCARNA3-201ENST00000517097 143 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 AC093023.1-201ENST00000547375 507 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 MIR3199-1-201ENST00000582434 88 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 RPL30P11-203ENST00000598995 310 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 MIR6715A-201ENST00000615929 79 ntBASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CCDC187A0A096LP49 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 SNORD115-8-201ENST00000363856 82 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.199-201ENST00000364014 102 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 SNORD115-38-201ENST00000365037 82 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.319-201ENST00000365138 92 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP240-201ENST00000365355 128 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AL138827.1-201ENST00000402666 306 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 RPL30P4-201ENST00000429309 333 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AC073901.1-201ENST00000462471 408 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AC023141.11-201ENST00000508864 202 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 SERF1AP1-201ENST00000514575 187 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 MIR2355-201ENST00000517199 87 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AC022868.1-201ENST00000517767 391 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AC090617.3-201ENST00000573670 475 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AL670379.2-201ENST00000604983 252 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AC240442.1-201ENST00000616055 283 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 AL590240.4-201ENST00000616908 390 ntBASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC187A0A096LP49 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms