Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 CBX3P1-201ENST00000325243 554 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RNU1-62P-201ENST00000362599 164 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 Y_RNA.38-201ENST00000362617 102 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RNU1-76P-201ENST00000362903 159 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 Y_RNA.123-201ENST00000363338 102 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 SNORA32.2-201ENST00000384049 122 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 SNORA36A-201ENST00000384221 132 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RNU6-378P-201ENST00000384324 107 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RNA5SP494-201ENST00000410653 129 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RNA5SP501-201ENST00000410990 112 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 VN1R36P-201ENST00000414936 291 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 DAP3P1-201ENST00000441522 278 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 RPS23P5-201ENST00000495419 428 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 TPRKBP2-201ENST00000565969 475 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 CPDP1-201ENST00000579660 283 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 AC146944.4-201ENST00000602697 718 ntBASIC1.59□□□□□ -2.15
USP16Q9Y5T5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.59□□□□□ -2.15
USP16Q9Y5T5 AC245060.5-201ENST00000610778 3293 ntBASIC1.59□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.3-201ENST00000362331 103 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.157-201ENST00000363638 102 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.269-201ENST00000364685 89 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 SNORD31B-201ENST00000364977 69 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.450-201ENST00000384198 113 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 RNU6-790P-201ENST00000384479 105 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
USP16Q9Y5T5 MIR320B2-201ENST00000408479 138 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.615-201ENST00000410769 117 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 RNU2-41P-201ENST00000410991 178 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.58□□□□□ -2.16
USP16Q9Y5T5 COX6CP14-201ENST00000469580 174 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.58□□□□□ -2.16
USP16Q9Y5T5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.58□□□□□ -2.16
USP16Q9Y5T5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.58□□□□□ -2.16
USP16Q9Y5T5 MIR4713-201ENST00000582691 75 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 SNORA4-201ENST00000584302 138 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 AC104458.1-201ENST00000608243 463 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 AL133215.3-201ENST00000609801 448 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
USP16Q9Y5T5 LINC02555-201ENST00000563933 1951 ntBASIC1.58□□□□□ -2.16
USP16Q9Y5T5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU6-562P-201ENST00000362731 107 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU5B-2P-201ENST00000363036 113 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU6-1090P-201ENST00000364065 94 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU4-12P-201ENST00000365233 139 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.414-201ENST00000384011 101 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 SNORA29-201ENST00000384183 140 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU6-784P-201ENST00000384330 106 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU6-1215P-201ENST00000384441 102 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 MIR518E-201ENST00000385252 88 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 RNU7-14P-201ENST00000459331 62 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 FAM206BP-201ENST00000510179 541 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.655-201ENST00000515919 96 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 AC005786.1-201ENST00000588553 154 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.57□□□□□ -2.16
USP16Q9Y5T5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USP16Q9Y5T5 SNORD114-27-201ENST00000363766 70 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 RNU6-1013P-201ENST00000384180 107 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 MIR300-201ENST00000401138 83 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.56□□□□□ -2.16
USP16Q9Y5T5 USP9YP28-201ENST00000435142 589 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AL353572.1-201ENST00000442490 417 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AC007395.1-201ENST00000451333 677 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 PCMTD1P1-201ENST00000455560 355 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 RNU6-256P-201ENST00000516747 97 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 RNU6-1098P-201ENST00000516772 96 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AC022254.1-201ENST00000567857 235 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AC005562.2-201ENST00000618264 111 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AC009033.1-201ENST00000624279 431 ntBASIC1.56□□□□□ -2.16
USP16Q9Y5T5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.56□□□□□ -2.16
USP16Q9Y5T5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.6-201ENST00000362350 114 ntBASIC1.55□□□□□ -2.16
USP16Q9Y5T5 Y_RNA.89-201ENST00000363031 102 ntBASIC1.55□□□□□ -2.16
USP16Q9Y5T5 RNU1-93P-201ENST00000364704 169 ntBASIC1.55□□□□□ -2.16
USP16Q9Y5T5 SNORA48.1-201ENST00000390879 135 ntBASIC1.55□□□□□ -2.16
USP16Q9Y5T5 RNU6-332P-201ENST00000391193 108 ntBASIC1.55□□□□□ -2.16
USP16Q9Y5T5 MTCO3P18-201ENST00000440206 761 ntBASIC1.55□□□□□ -2.16
USP16Q9Y5T5 AC074290.1-201ENST00000448883 135 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms