Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIR3162-201ENST00000581818 82 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 SNORD113-5-201ENST00000607261 78 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 U2.14-201ENST00000615943 113 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 SNORD115-8-201ENST00000363856 82 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RNY1-201ENST00000364228 113 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.269-201ENST00000364685 89 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 SNORD115-38-201ENST00000365037 82 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-21P-201ENST00000384710 107 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 MIR329-1-201ENST00000385028 80 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AL138827.1-201ENST00000402666 306 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RNU4-30P-201ENST00000410245 143 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 BMS1P22-201ENST00000414726 313 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC019205.3-201ENST00000424573 156 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 SNORA81.3-201ENST00000517283 198 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC109329.2-201ENST00000519658 482 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC115990.1-201ENST00000526957 301 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 RRN3P3-201ENST00000549207 578 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 MIR4672-201ENST00000583126 81 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AL449363.1-201ENST00000617815 186 ntBASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CTDP1Q9Y5B0 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AL355596.1-201ENST00000565399 3996 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AC062016.1-201ENST00000355719 319 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 MIR449A-201ENST00000362113 91 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-461P-201ENST00000364195 107 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.297-201ENST00000364950 91 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-19P-201ENST00000384718 107 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 SNORA26.3-201ENST00000391119 136 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 PTGES3P4-201ENST00000426243 356 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AP000705.1-201ENST00000454567 350 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 PRELID3BP1-201ENST00000457142 540 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AC073901.1-201ENST00000462471 408 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 RPL23AP70-201ENST00000483361 460 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 RN7SKP43-201ENST00000516173 320 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-567P-201ENST00000516746 107 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 RNA5SP54-201ENST00000516951 92 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AC105137.2-201ENST00000569073 466 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 ZNF861P-201ENST00000588126 639 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AC037487.3-201ENST00000606668 112 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 AL365434.2-201ENST00000607979 234 ntBASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
CTDP1Q9Y5B0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.29-201ENST00000362570 113 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-859P-201ENST00000362728 107 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-626P-201ENST00000363354 107 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.200-201ENST00000364018 102 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.286-201ENST00000364813 102 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-1145P-201ENST00000384246 107 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 RNU2-52P-201ENST00000410680 190 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AC023141.4-201ENST00000412031 328 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AL109933.2-201ENST00000452651 260 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AC090525.1-201ENST00000479116 478 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 RPL26P26-201ENST00000480251 434 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AC103975.1-201ENST00000482506 483 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 SNORA31.16-201ENST00000516773 139 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AK6P2-201ENST00000549020 471 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AL078605.1-201ENST00000603529 500 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 IGHVIII-44-202ENST00000636235 289 ntBASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTDP1Q9Y5B0 AC010329.5-201ENST00000623497 2174 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RNU1-35P-201ENST00000362782 153 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-873P-201ENST00000363833 107 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.274-201ENST00000364714 101 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-1062P-201ENST00000383908 107 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-20P-201ENST00000384106 107 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AL133475.1-201ENST00000404414 305 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms