Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNU6-76P-201ENST00000384060 104 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-20P-201ENST00000384106 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-514P-201ENST00000384208 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RPL21P3-201ENST00000395517 478 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC007560.1-201ENST00000426912 237 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC009414.1-201ENST00000427200 443 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AL589765.3-201ENST00000446084 462 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC146507.2-201ENST00000460608 476 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 SRIP1-201ENST00000489235 288 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RN7SKP43-201ENST00000516173 320 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP282-201ENST00000516355 108 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.677-201ENST00000516401 85 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 SNORA31.19-201ENST00000517079 126 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 MIR3613-201ENST00000579844 87 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC002545.1-201ENST00000592511 181 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.09□□□□□ -2.08
NOTCH3Q9UM47 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
NOTCH3Q9UM47 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
NOTCH3Q9UM47 RNA5SP361-201ENST00000362686 118 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU6-78P-201ENST00000362897 107 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.164-201ENST00000363709 102 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU6-312P-201ENST00000364629 107 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.569-201ENST00000384749 103 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU1-139P-201ENST00000391307 165 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNA5SP89-201ENST00000410300 108 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC090774.1-201ENST00000435925 246 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RPL31P13-201ENST00000484151 370 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU6-927P-201ENST00000516199 100 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 NDUFA5P6-201ENST00000542110 379 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 MIR3145-201ENST00000580727 82 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC060766.3-201ENST00000591442 263 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AL133393.1-201ENST00000603277 287 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC068831.7-201ENST00000616954 363 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 MIR7153-201ENST00000637758 57 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 MTND5P32-201ENST00000560711 1802 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNA5SP502-201ENST00000362694 119 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU6-899P-201ENST00000363947 107 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU6-166P-201ENST00000384371 107 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.525-201ENST00000384570 113 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNY4P18-201ENST00000391107 89 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU2-54P-201ENST00000410299 190 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RPL32P35-201ENST00000415214 394 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 MTATP6P4-201ENST00000427725 675 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC109810.1-201ENST00000534066 224 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 MIR3605-201ENST00000583214 100 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 CTSLP2-204ENST00000629029 392 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 AC009812.4-201ENST00000569134 1805 ntBASIC2.08□□□□□ -2.08
NOTCH3Q9UM47 RNU6-1249P-201ENST00000363237 111 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU6-103P-201ENST00000363686 107 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.420-201ENST00000384043 110 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 SNORA20-201ENST00000384662 132 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 MIR569-201ENST00000385228 96 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC009963.1-201ENST00000417265 157 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC074290.1-201ENST00000448883 135 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RN7SL75P-201ENST00000461926 281 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU4-57P-201ENST00000515980 135 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC115990.1-201ENST00000526957 301 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AL391261.3-201ENST00000557194 520 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC091932.3-201ENST00000624223 323 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 SCARNA4-202ENST00000625402 129 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 snoU18.1-201ENST00000629629 71 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 ZNF204P-201ENST00000416749 2397 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU5A-1-201ENST00000362698 116 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.178-201ENST00000363832 102 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.182-201ENST00000363880 111 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 SNORD115-32-201ENST00000364079 82 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU6-805P-201ENST00000365643 106 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 MIR329-1-201ENST00000385028 80 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 SNORA68.2-201ENST00000391263 128 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 MIR1250-201ENST00000408098 113 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 MIR1302-4-201ENST00000408701 150 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU6-966P-201ENST00000516479 104 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU6-567P-201ENST00000516746 107 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 RNU6-1198P-201ENST00000516904 67 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC006001.4-201ENST00000622243 395 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 MIR3658-201ENST00000636291 56 ntBASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms