Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR376A1-201ENST00000616574 68 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 Z82195.2-201ENST00000612348 18351 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 RNU6-529P-201ENST00000363383 104 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 RNU6-280P-201ENST00000364145 104 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.478-201ENST00000384358 107 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 MIR147B-201ENST00000390185 80 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AC105272.1-201ENST00000438604 198 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 RPL39P38-201ENST00000467018 153 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AC098869.1-201ENST00000481627 292 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 HMGB1P35-201ENST00000503360 598 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AC091826.1-201ENST00000514065 313 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 SNORA31.6-201ENST00000516241 130 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 AL356575.1-201ENST00000603008 283 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 SNORD98-201ENST00000636377 67 ntBASIC2.85□□□□□ -1.95
DKK3Q9UBP4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DKK3Q9UBP4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 SNORD81.1-201ENST00000363064 77 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.257-201ENST00000364596 102 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 RNU4-56P-201ENST00000364700 142 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 MIR329-1-201ENST00000385028 80 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 MIR504-201ENST00000385065 83 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 SNORD12B-201ENST00000410433 91 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 RNU2-38P-201ENST00000410856 79 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 RNA5SP184-201ENST00000411071 108 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AIMP1P2-201ENST00000425294 312 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AC087499.2-201ENST00000432861 149 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 snoU13.6-201ENST00000458785 104 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 GZMAP1-201ENST00000503054 631 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 MTND1P19-201ENST00000511780 315 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.84□□□□□ -1.95
DKK3Q9UBP4 RNU6-1023P-201ENST00000516137 106 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 RNU6-570P-201ENST00000517051 105 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AC091544.4-201ENST00000555268 342 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 UBL5P4-201ENST00000562584 236 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AC023824.2-201ENST00000566185 400 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AC005357.1-201ENST00000588399 301 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 MIR7515-201ENST00000637837 67 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 AC131280.1-202ENST00000624067 4211 ntBASIC2.84□□□□□ -1.95
DKK3Q9UBP4 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.96
DKK3Q9UBP4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
DKK3Q9UBP4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
DKK3Q9UBP4 RNU6-245P-201ENST00000384020 107 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.552-201ENST00000384665 112 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 MIR487A-201ENST00000385009 80 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 AC138623.1-201ENST00000418060 216 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 ARL5AP4-201ENST00000430731 512 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.83□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.680-201ENST00000516441 93 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 RNU6-388P-201ENST00000517012 105 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 RNU6-389P-201ENST00000517048 105 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 CYCSP23-201ENST00000519781 313 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 AC079598.5-201ENST00000547460 117 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.83□□□□□ -1.96
DKK3Q9UBP4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.83□□□□□ -1.96
DKK3Q9UBP4 MIR3923-201ENST00000579521 83 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 MIR5695-201ENST00000579717 85 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 AP001282.2-201ENST00000616149 309 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.83□□□□□ -1.96
DKK3Q9UBP4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
DKK3Q9UBP4 MTND5P6-201ENST00000422338 1798 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 RNA5SP361-201ENST00000362686 118 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 SNORA67.1-201ENST00000364749 141 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 MIR215-201ENST00000384858 110 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 AL133475.1-201ENST00000404414 305 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 AC112220.1-201ENST00000434628 355 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 AC010095.1-201ENST00000443543 144 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 RPL26P26-201ENST00000480251 434 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.82□□□□□ -1.96
DKK3Q9UBP4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.82□□□□□ -1.96
DKK3Q9UBP4 RNU1-104P-201ENST00000517280 175 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 MIR4423-201ENST00000580922 80 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 MIR3128-201ENST00000581957 66 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms