Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 Y_RNA.717-201ENST00000517106 92 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.96□□□□□ -2.26
CLN6Q9NWW5 MIR3664-201ENST00000579074 99 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 MIR5692C1-201ENST00000585309 91 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 AC146944.4-201ENST00000602697 718 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 AL929325.1-201ENST00000603096 117 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 AL353770.2-201ENST00000620024 78 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.96□□□□□ -2.26
CLN6Q9NWW5 AC139792.3-201ENST00000623525 224 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 SCARNA4-201ENST00000629045 128 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 OR5AK4P-201ENST00000635912 903 ntBASIC0.96□□□□□ -2.26
CLN6Q9NWW5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
CLN6Q9NWW5 RNU4-66P-201ENST00000365199 138 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 RNU6-933P-201ENST00000384424 107 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AL049545.1-201ENST00000401856 572 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 RNU4-62P-201ENST00000410125 130 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 RNU6-325P-201ENST00000411132 105 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AL663109.1-201ENST00000411498 844 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 CDK8P2-201ENST00000415020 547 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 TIMM9P3-201ENST00000428659 274 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 MRPS10P2-201ENST00000431226 381 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 RNU6-956P-201ENST00000458868 103 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 RNU7-95P-201ENST00000459222 64 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 HMGB1P29-201ENST00000505659 499 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 SUMO2P16-201ENST00000519475 264 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 MTND1P35-201ENST00000526739 508 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AL157687.1-201ENST00000554853 619 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 MIR4742-201ENST00000581069 85 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AC004492.1-201ENST00000607036 742 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.95□□□□□ -2.26
CLN6Q9NWW5 AL158063.1-201ENST00000615349 536 ntBASIC0.95□□□□□ -2.26
CLN6Q9NWW5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CLN6Q9NWW5 Y_RNA.378-201ENST00000365652 113 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RNU6-214P-201ENST00000384130 107 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RNY3P9-201ENST00000384727 106 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AL356776.1-201ENST00000406574 447 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 MIR1261-201ENST00000408659 82 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AC008134.1-201ENST00000420943 193 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AL121890.1-201ENST00000435457 205 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RN7SKP298-201ENST00000515950 94 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 SNORD116-28-201ENST00000516123 91 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RNU1-142P-201ENST00000516682 145 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RNU1-117P-201ENST00000517041 158 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AL118558.2-201ENST00000556294 238 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AC021506.2-201ENST00000612354 169 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AC137590.2-201ENST00000619709 240 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 Z69908.1-201ENST00000622603 247 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AC008873.1-201ENST00000625051 138 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 snoZ196.1-201ENST00000625269 89 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 AC068647.2-201ENST00000637380 353 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 ZNF204P-201ENST00000416749 2397 ntBASIC0.94□□□□□ -2.26
CLN6Q9NWW5 RNU1-22P-201ENST00000363334 158 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 RNA5SP213-201ENST00000391031 106 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.93□□□□□ -2.26
CLN6Q9NWW5 AC010154.1-201ENST00000425857 269 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 AL591806.2-201ENST00000433122 173 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 HSPE1P13-201ENST00000451143 297 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 SRRM1P2-201ENST00000464531 1192 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 RN7SL429P-201ENST00000479090 223 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 RN7SL489P-201ENST00000486185 223 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 RN7SL327P-201ENST00000488659 223 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 MTCO1P29-201ENST00000496868 288 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 Y_RNA.654-201ENST00000497848 106 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.93□□□□□ -2.26
CLN6Q9NWW5 AC121247.2-201ENST00000604776 136 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 MIR8076-201ENST00000611401 83 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 AL359075.3-201ENST00000613288 217 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 RN7SL853P-201ENST00000617250 223 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.93□□□□□ -2.26
CLN6Q9NWW5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CLN6Q9NWW5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CLN6Q9NWW5 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 RNU6-38P-201ENST00000384085 107 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 SNORA75-201ENST00000384158 137 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 RNU6-1031P-201ENST00000384773 107 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 MIR222-201ENST00000384992 110 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 SNORA11.2-201ENST00000408318 127 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 RNU4-55P-201ENST00000410731 137 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AC016909.1-201ENST00000415916 166 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AC092447.3-201ENST00000426027 686 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AC092436.3-201ENST00000511788 257 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms