Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 RNU6-344P-201ENST00000516635 111 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC104581.2-201ENST00000572227 430 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC013412.1-201ENST00000610687 192 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 MIR8074-201ENST00000615081 81 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC006504.8-201ENST00000621046 635 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC100810.6-201ENST00000638068 285 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC010615.1-201ENST00000594254 1764 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-245P-201ENST00000384020 107 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 Y_RNA.453-201ENST00000384223 109 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 MIR520A-201ENST00000384862 85 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 SNORD115-47-201ENST00000391226 86 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 AC025465.3-201ENST00000510570 311 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 AC008873.1-201ENST00000625051 138 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 MIR3662-201ENST00000637030 95 ntBASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1305P-201ENST00000364353 104 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 MIR32-201ENST00000384965 70 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 CST2P1-201ENST00000425770 87 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 AC074290.1-201ENST00000448883 135 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 snoU13.30-201ENST00000458951 104 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1198P-201ENST00000516904 67 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-58P-201ENST00000517143 103 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 RNA5SP437-201ENST00000517249 129 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 AC084364.2-201ENST00000546924 395 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 AC126177.8-201ENST00000618339 1015 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 MIR338-201ENST00000636369 67 ntBASIC1.59□□□□□ -2.15
ZCCHC3Q9NUD5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ZCCHC3Q9NUD5 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.16
ZCCHC3Q9NUD5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 SNORA63D-201ENST00000364359 132 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 MIR153-2-201ENST00000385225 87 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 EBAG9P1-201ENST00000418955 543 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 MTND1P34-201ENST00000438556 671 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-1088P-201ENST00000516850 104 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-273P-201ENST00000516937 96 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 MIR5696-201ENST00000578474 85 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AP003465.2-201ENST00000602571 373 ntBASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
ZCCHC3Q9NUD5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 Y_RNA.6-201ENST00000362350 114 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-137P-201ENST00000363680 108 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-596P-201ENST00000365395 98 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-1013P-201ENST00000384180 107 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-306P-201ENST00000384617 107 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNA5SP504-201ENST00000410676 117 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 MTATP6P13-201ENST00000438531 667 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 MTND4LP16-201ENST00000440828 295 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 MTND1P17-201ENST00000448961 204 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNU7-57P-201ENST00000459540 60 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 HMGN1P13-201ENST00000505795 138 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 RNA5SP454-201ENST00000517231 127 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 AC027288.2-201ENST00000553028 243 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 MIR6845-201ENST00000613182 61 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 AL078596.1-201ENST00000624856 447 ntBASIC1.57□□□□□ -2.16
ZCCHC3Q9NUD5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-414P-201ENST00000363705 104 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 Y_RNA.319-201ENST00000365138 92 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 MIR548F1-201ENST00000408667 84 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 RPS20P15-201ENST00000412792 311 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 AC243428.1-201ENST00000421099 264 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 RPL26P26-201ENST00000480251 434 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-566P-201ENST00000516790 107 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms