Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 MIR331-201ENST00000362302 94 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 Y_RNA.466-201ENST00000384294 113 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 RNU6-813P-201ENST00000384691 107 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 RN7SKP167-201ENST00000411047 285 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 AC002076.2-201ENST00000617362 122 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 AC140479.6-201ENST00000633535 357 ntBASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
PRDM9Q9NQV7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 MIR3074-201ENST00000384885 81 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 MIR548A2-201ENST00000384956 97 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 HMGN2P8-201ENST00000391458 268 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 MIR1911-201ENST00000410783 80 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AC097463.2-201ENST00000421074 142 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AC010099.1-201ENST00000455434 375 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 RN7SL303P-201ENST00000469773 251 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 RNU6-830P-201ENST00000516353 107 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AP000867.2-201ENST00000532468 320 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 RN7SL703P-201ENST00000578485 302 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AC008507.4-201ENST00000585464 127 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AC087685.1-201ENST00000587507 141 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AL160290.3-201ENST00000604869 165 ntBASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRDM9Q9NQV7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 SNRPGP13-201ENST00000442212 177 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 PGBD4P5-201ENST00000445958 426 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 HMGN1P7-201ENST00000491722 313 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 MIR449C-201ENST00000516047 92 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 RNA5SP73-201ENST00000516744 108 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 AC074050.1-201ENST00000563247 211 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 MIR378J-201ENST00000611988 109 ntBASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.1□□□□□ -1.75
PRDM9Q9NQV7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 MIR548D2-201ENST00000384955 97 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AL513477.1-202ENST00000417061 214 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC004552.1-201ENST00000419089 348 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 RPS26P3-201ENST00000470205 348 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC090543.2-201ENST00000483963 348 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC004057.1-201ENST00000485827 348 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 RNA5SP395-201ENST00000516567 118 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 RNU6-1096P-201ENST00000517089 102 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 RNU6-1231P-201ENST00000517185 103 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC068657.1-201ENST00000520807 306 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC006064.5-201ENST00000541782 248 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC013412.1-201ENST00000610687 192 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 MIR6810-201ENST00000622701 70 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC011944.2-201ENST00000624440 683 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 AC090517.3-201ENST00000625170 141 ntBASIC4.09□□□□□ -1.75
PRDM9Q9NQV7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRDM9Q9NQV7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRDM9Q9NQV7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRDM9Q9NQV7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRDM9Q9NQV7 RNU6-690P-201ENST00000365242 106 ntBASIC4.08□□□□□ -1.76
PRDM9Q9NQV7 RPL21P65-201ENST00000406094 466 ntBASIC4.08□□□□□ -1.76
PRDM9Q9NQV7 MIR1179-201ENST00000408703 91 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms