Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC073850.1-201ENST00000449243 255 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AL109933.2-201ENST00000452651 260 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AC006463.2-201ENST00000473326 348 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AC008033.2-201ENST00000542626 177 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AL391358.1-201ENST00000605342 190 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AC211433.2-201ENST00000608433 387 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AC004832.5-201ENST00000608677 401 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 MT-TT-201ENST00000387460 66 ntBASIC5.04□□□□□ -1.6
RTN4Q9NQC3 MIR1262-201ENST00000408276 93 ntBASIC5.04□□□□□ -1.6
RTN4Q9NQC3 AC006461.1-201ENST00000412637 326 ntBASIC5.04□□□□□ -1.6
RTN4Q9NQC3 AL772161.1-201ENST00000439130 476 ntBASIC5.04□□□□□ -1.6
RTN4Q9NQC3 AC025884.1-201ENST00000556034 378 ntBASIC5.04□□□□□ -1.6
RTN4Q9NQC3 AC091905.4-201ENST00000623432 202 ntBASIC5.04□□□□□ -1.6
RTN4Q9NQC3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTN4Q9NQC3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTN4Q9NQC3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
RTN4Q9NQC3 RNU6-23P-201ENST00000363283 107 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 RNU6-1130P-201ENST00000365434 107 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 MIR585-201ENST00000384887 94 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 MIR105-2-201ENST00000385083 81 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 SNORA26-201ENST00000391286 122 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 BX510359.3-201ENST00000422168 306 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 CEACAMP7-201ENST00000444105 496 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 AL021707.8-201ENST00000609428 183 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 U7.8-201ENST00000619968 63 ntBASIC5.03□□□□□ -1.6
RTN4Q9NQC3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RTN4Q9NQC3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTN4Q9NQC3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTN4Q9NQC3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4Q9NQC3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4Q9NQC3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RTN4Q9NQC3 RNA5SP305-201ENST00000362665 119 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 RNA5SP123-201ENST00000363244 119 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.587-201ENST00000391210 103 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 RPL36AP41-201ENST00000493820 306 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 YWHAEP4-201ENST00000505390 198 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 FCF1P8-201ENST00000510322 597 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 RNU6-341P-201ENST00000516973 96 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.714-201ENST00000517065 90 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 AL160236.1-201ENST00000556317 195 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 MIR4662B-201ENST00000579498 81 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 AL929325.1-201ENST00000603096 117 ntBASIC5.02□□□□□ -1.61
RTN4Q9NQC3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4Q9NQC3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
RTN4Q9NQC3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4Q9NQC3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 RPS27P1-201ENST00000450552 247 ntBASIC5.01□□□□□ -1.61
RTN4Q9NQC3 RNU7-26P-201ENST00000458980 63 ntBASIC5.01□□□□□ -1.61
RTN4Q9NQC3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 MIR3646-201ENST00000578301 84 ntBASIC5.01□□□□□ -1.61
RTN4Q9NQC3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC5.01□□□□□ -1.61
RTN4Q9NQC3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4Q9NQC3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RTN4Q9NQC3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
RTN4Q9NQC3 RNU6-199P-201ENST00000362954 107 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 RNU6-151P-201ENST00000364158 107 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 SNORD114-6-201ENST00000364393 72 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 MIR1278-201ENST00000408753 81 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 SNORA3C-201ENST00000408792 125 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.621-201ENST00000411065 96 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5□□□□□ -1.61
RTN4Q9NQC3 RNU6-56P-201ENST00000516986 93 ntBASIC5□□□□□ -1.61
RTN4Q9NQC3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5□□□□□ -1.61
RTN4Q9NQC3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC5□□□□□ -1.61
RTN4Q9NQC3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RTN4Q9NQC3 AL161912.2-201ENST00000565707 3007 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RNA5SP191-201ENST00000362585 102 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RNA5SP507-201ENST00000363603 121 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RNA5SP493-201ENST00000364115 91 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.215-201ENST00000364204 112 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RNU1-91P-201ENST00000364746 163 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 MIR513C-201ENST00000401352 84 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RN7SKP267-201ENST00000410381 285 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RNU6-346P-201ENST00000516288 111 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RNU6-1299P-201ENST00000516316 100 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 RPPH1-2P-201ENST00000516688 293 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 AP001880.2-201ENST00000538233 448 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 uc_338.4-201ENST00000616635 176 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 MIR6079-201ENST00000635807 62 ntBASIC4.99□□□□□ -1.61
RTN4Q9NQC3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RTN4Q9NQC3 ZNF271P-202ENST00000465539 1970 ntBASIC4.98□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.432-201ENST00000384087 111 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms