Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNU2-53P-201ENST00000516257 147 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 RNU6-764P-201ENST00000516396 105 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 Y_RNA.720-201ENST00000517166 92 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 CYP4A27P-201ENST00000567218 190 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AC090617.3-201ENST00000573670 475 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AC008737.2-201ENST00000599446 118 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AL590808.1-201ENST00000618696 141 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AC008121.3-201ENST00000618726 433 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AC243829.7-201ENST00000633081 225 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SLC52A3Q9NQ40 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SLC52A3Q9NQ40 MTND5P16-201ENST00000460269 1703 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 RNU4-15P-201ENST00000362613 141 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-450P-201ENST00000364654 107 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 Y_RNA.319-201ENST00000365138 92 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 Y_RNA.358-201ENST00000365491 99 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 Y_RNA.557-201ENST00000384680 107 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 MIR95-201ENST00000385072 81 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-823P-201ENST00000391042 103 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 Y_RNA.605-201ENST00000410577 105 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AL590556.1-201ENST00000423231 483 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 MTND5P22-201ENST00000458380 195 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AC107032.1-201ENST00000485945 480 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AC132942.1-201ENST00000486753 483 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 CKS1BP2-201ENST00000497342 240 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AC093852.1-201ENST00000503587 266 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-567P-201ENST00000516746 107 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 RNU1-104P-201ENST00000517280 175 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 HSBP1P1-201ENST00000555205 166 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AL132822.1-201ENST00000617063 513 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 AC137590.2-201ENST00000619709 240 ntBASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
SLC52A3Q9NQ40 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-137P-201ENST00000363680 108 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-708P-201ENST00000384217 107 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 MIR10B-201ENST00000385011 110 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AL358176.2-201ENST00000425769 204 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 EIF1P2-201ENST00000428233 350 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 USP9YP16-201ENST00000430287 407 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AL161788.1-201ENST00000441805 169 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 USP9YP23-201ENST00000455085 407 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 RNU7-87P-201ENST00000459343 62 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC140059.1-201ENST00000489238 361 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-1114P-201ENST00000516022 107 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 SNORA48.11-201ENST00000517015 89 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-58P-201ENST00000517143 103 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC022616.4-201ENST00000522985 181 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC040926.1-201ENST00000530195 238 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC021269.2-201ENST00000532318 330 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AL713866.2-201ENST00000603579 219 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC016727.2-201ENST00000603988 621 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AC009831.4-201ENST00000620744 325 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 AL078596.1-201ENST00000624856 447 ntBASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC52A3Q9NQ40 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 SNORD14.1-201ENST00000365609 90 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 RNU1-52P-201ENST00000384190 164 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 MIR628-201ENST00000385229 95 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 SNORA46.1-201ENST00000391069 153 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 RNU6-159P-201ENST00000391080 106 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC096638.1-201ENST00000444678 216 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 U8.20-201ENST00000459445 131 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC010655.3-201ENST00000478818 450 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 Y_RNA.721-201ENST00000517207 102 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AL442163.3-201ENST00000554110 156 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AL117187.1-201ENST00000555482 181 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 UBL5P4-201ENST00000562584 236 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC125232.2-201ENST00000592457 143 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 RPL30P11-203ENST00000598995 310 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 PCGEM1.1-201ENST00000613431 131 ntBASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SLC52A3Q9NQ40 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC52A3Q9NQ40 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SLC52A3Q9NQ40 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms