Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC010099.1-201ENST00000455434 375 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AC007215.1-201ENST00000464893 276 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RPL30P14-201ENST00000482744 348 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AP005660.1-201ENST00000522972 293 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 MIR3923-201ENST00000579521 83 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AL713866.2-201ENST00000603579 219 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AL034555.1-201ENST00000604816 211 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 SNORA18.2-201ENST00000383865 132 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 MIR7-3-201ENST00000384898 110 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 RNU6-763P-201ENST00000390865 106 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 SNORA48.7-201ENST00000391302 135 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.637-201ENST00000459424 114 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 RN7SL863P-201ENST00000462370 296 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 RPL31P41-201ENST00000477967 372 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 AC140059.1-201ENST00000489238 361 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 DEFB131C-201ENST00000528817 165 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 MIR548AI-201ENST00000579940 88 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 MIR7112-201ENST00000616126 65 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 MIR6076-201ENST00000617521 113 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 MIR6075-201ENST00000620782 95 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 AC068700.1-201ENST00000565862 3754 ntBASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH18Q9HCL0 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.182-201ENST00000363880 111 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.272-201ENST00000364696 102 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 SNORA7.4-201ENST00000384249 137 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 RNVU1-14-201ENST00000384770 164 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 U3.40-201ENST00000408706 208 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 RN7SKP27-201ENST00000410684 333 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 AC004386.2-201ENST00000441858 148 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 RN7SL499P-201ENST00000481141 276 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 RNU6-436P-201ENST00000516171 114 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 AC115990.1-201ENST00000526957 301 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 RPS15AP11-201ENST00000594193 385 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 AP001485.1-201ENST00000604799 199 ntBASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH18Q9HCL0 AC093831.2-201ENST00000624393 3427 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.238-201ENST00000364441 102 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 RNU6-487P-201ENST00000365430 104 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.412-201ENST00000384001 104 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 RNU6-198P-201ENST00000384258 104 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 MIR147B-201ENST00000390185 80 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 RNA5SP120-201ENST00000410900 112 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 SEPT7P4-201ENST00000437076 306 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 PRSS3P4-201ENST00000453323 162 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 AC112771.1-201ENST00000463581 102 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 RN7SL601P-201ENST00000471221 293 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 HSPE1P18-201ENST00000517602 280 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 SUMO2P18-201ENST00000518873 252 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 MIR5006-201ENST00000583027 110 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 AC006380.1-201ENST00000603598 186 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 SNRPGP20-201ENST00000604477 205 ntBASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH18Q9HCL0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RNU4-15P-201ENST00000362613 141 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 SNORD113-1-201ENST00000365321 69 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RNU6-245P-201ENST00000384020 107 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.572-201ENST00000384757 98 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RNA5SP171-201ENST00000391071 115 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RNU6-131P-201ENST00000391144 107 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 SNORA12-201ENST00000391162 147 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 AL135790.2-201ENST00000437701 267 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 RPL23AP70-201ENST00000483361 460 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 AC145146.1-201ENST00000496370 254 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms