Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 AC145146.1-201ENST00000496370 254 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNU6-897P-201ENST00000517135 105 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 MIR5695-201ENST00000579717 85 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RPL30P11-203ENST00000598995 310 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 AC005296.1-201ENST00000616145 209 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.149-201ENST00000363558 117 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.152-201ENST00000363578 100 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 RNU6-873P-201ENST00000363833 107 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 RNU6-196P-201ENST00000384315 107 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 SNORA46.1-201ENST00000391069 153 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 FO393413.1-201ENST00000402892 195 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 U6atac.2-201ENST00000408644 118 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 RNU6-1001P-201ENST00000411265 100 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 RPL30P4-201ENST00000429309 333 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 SCARNA3-201ENST00000517097 143 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 AC069528.2-201ENST00000624849 1991 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 AC007336.1-201ENST00000576365 3828 ntBASIC2.66□□□□□ -1.98
USP29Q9HBJ7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.66□□□□□ -1.98
USP29Q9HBJ7 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
USP29Q9HBJ7 ZNF204P-201ENST00000416749 2397 ntBASIC2.65□□□□□ -1.98
USP29Q9HBJ7 MIR6073-201ENST00000352083 89 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 SNORD56.5-201ENST00000364281 72 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 RNU6-879P-201ENST00000364328 108 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 RNU6-806P-201ENST00000365147 105 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 CR769767.1-201ENST00000436337 346 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 IPO7P1-201ENST00000442031 636 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC080013.2-201ENST00000460866 323 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 RNU6-397P-201ENST00000516226 104 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 RN7SKP49-201ENST00000516675 260 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC093023.1-201ENST00000547375 507 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AP000942.4-201ENST00000604811 241 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 MIR6817-201ENST00000615588 66 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC240442.1-201ENST00000616055 283 ntBASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USP29Q9HBJ7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.105-201ENST00000363182 111 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 RNU6-238P-201ENST00000363313 106 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 RNU6-280P-201ENST00000364145 104 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 SNORD78.2-201ENST00000391076 69 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 DYNLT3P2-201ENST00000442517 295 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 SRIP1-201ENST00000489235 288 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 DEFB131C-201ENST00000528817 165 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AC027176.1-201ENST00000560204 514 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 MYL12BP1-201ENST00000569826 507 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AL713866.2-201ENST00000603579 219 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AL356280.1-201ENST00000603614 379 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AL449363.1-201ENST00000617815 186 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AL590808.1-201ENST00000618696 141 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USP29Q9HBJ7 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
USP29Q9HBJ7 U3.9-201ENST00000363823 204 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.183-201ENST00000363882 113 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 RNU6-770P-201ENST00000363929 105 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.193-201ENST00000363979 102 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 SNORD32B-201ENST00000364460 84 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 RNU6-245P-201ENST00000384020 107 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.452-201ENST00000384202 108 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms