Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 BTF3P4-201ENST00000418852 495 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 AL590632.1-201ENST00000424289 371 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 MTCO3P18-201ENST00000440206 761 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.47□□□□□ -2.17
CITED1Q99966 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 AC010531.2-201ENST00000465012 153 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.47□□□□□ -2.17
CITED1Q99966 MIR3672-201ENST00000584290 82 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CITED1Q99966 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.47□□□□□ -2.17
CITED1Q99966 AC009033.1-201ENST00000624279 431 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 AC022513.1-201ENST00000624512 117 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 MTND5P9-201ENST00000503854 1755 ntBASIC1.47□□□□□ -2.17
CITED1Q99966 RNY1P10-201ENST00000363268 113 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 Y_RNA.453-201ENST00000384223 109 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 RNU6-1215P-201ENST00000384441 102 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MIR517A-201ENST00000385001 87 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MIR1283-1-201ENST00000408494 87 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 RPL21P111-201ENST00000418453 477 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.46□□□□□ -2.18
CITED1Q99966 MTCO3P46-201ENST00000425787 232 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
CITED1Q99966 AC003989.2-201ENST00000440224 169 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.46□□□□□ -2.18
CITED1Q99966 ATP5J2P3-201ENST00000451550 258 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MTCO3P8-201ENST00000453691 755 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MTND1P11-201ENST00000456661 876 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MTCO2P30-201ENST00000503662 364 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.46□□□□□ -2.18
CITED1Q99966 AC107393.1-201ENST00000512403 346 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 ACA59.1-201ENST00000515966 143 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 RNU6-273P-201ENST00000516937 96 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.46□□□□□ -2.18
CITED1Q99966 RRN3P3-201ENST00000549207 578 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 TPRKBP2-201ENST00000565969 475 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.46□□□□□ -2.18
CITED1Q99966 U4.5-201ENST00000617137 123 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.46□□□□□ -2.18
CITED1Q99966 AC100810.6-201ENST00000638068 285 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 MTND4P5-201ENST00000435821 1374 ntBASIC1.46□□□□□ -2.18
CITED1Q99966 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CITED1Q99966 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CITED1Q99966 Y_RNA.89-201ENST00000363031 102 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 Y_RNA.295-201ENST00000364918 102 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 U8.10-201ENST00000384260 133 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 Y_RNA.516-201ENST00000384541 124 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 SNORD116-4-201ENST00000384733 96 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 C8orf59P1-201ENST00000429930 303 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.45□□□□□ -2.18
CITED1Q99966 AC009237.7-201ENST00000447357 229 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 RNU7-66P-201ENST00000459469 62 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 AC007215.1-201ENST00000464893 276 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 AL163540.1-201ENST00000485382 386 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 RNU6-1041P-201ENST00000516254 102 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 RNU6-948P-201ENST00000516374 107 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.45□□□□□ -2.18
CITED1Q99966 MIR7111-201ENST00000619751 72 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 AC006504.8-201ENST00000621046 635 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.45□□□□□ -2.18
CITED1Q99966 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.45□□□□□ -2.18
CITED1Q99966 ZNF204P-201ENST00000416749 2397 ntBASIC1.45□□□□□ -2.18
CITED1Q99966 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CITED1Q99966 SNORD50.1-201ENST00000362987 71 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 Y_RNA.212-201ENST00000364177 102 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 RNA5SP160-201ENST00000364866 120 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 SNORD116-11-201ENST00000383882 92 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.44□□□□□ -2.18
CITED1Q99966 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.44□□□□□ -2.18
CITED1Q99966 DAP3P1-201ENST00000441522 278 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 NFU1P2-201ENST00000448700 469 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC005908.1-201ENST00000468701 347 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC114982.1-201ENST00000469402 321 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.44□□□□□ -2.18
CITED1Q99966 AC067942.3-201ENST00000512025 362 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 RNU6-250P-201ENST00000516958 103 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 MTND1P5-201ENST00000517906 940 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.44□□□□□ -2.18
CITED1Q99966 SNORA59B-202ENST00000578183 701 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC010928.2-201ENST00000588017 287 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AP003465.2-201ENST00000602571 373 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 SNRPGP19-201ENST00000603826 189 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AL359821.1-201ENST00000605519 182 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC124303.1-201ENST00000605703 360 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.44□□□□□ -2.18
CITED1Q99966 AC093913.1-201ENST00000614178 329 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 AC090617.10-201ENST00000624308 134 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 SCARNA4-201ENST00000629045 128 ntBASIC1.44□□□□□ -2.18
CITED1Q99966 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
CITED1Q99966 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CITED1Q99966 RNU6-862P-201ENST00000362804 105 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 Y_RNA.67-201ENST00000362870 100 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 RNU6-112P-201ENST00000363599 104 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 RNU6-1305P-201ENST00000364353 104 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms