Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR6779-201ENST00000617283 64 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC139792.2-201ENST00000624218 587 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 MIR3688-2-201ENST00000636963 87 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC245060.5-201ENST00000610778 3293 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
FOXC2Q99958 MTND5P9-201ENST00000503854 1755 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RNU6-227P-201ENST00000362865 103 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 Y_RNA.212-201ENST00000364177 102 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RNU6-439P-201ENST00000384188 106 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RNU6-997P-201ENST00000384725 107 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 MIR450B-201ENST00000401182 78 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RNU6-1148P-201ENST00000410992 104 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RPS20P15-201ENST00000412792 311 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
FOXC2Q99958 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.3□□□□□ -2.2
FOXC2Q99958 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.3□□□□□ -2.2
FOXC2Q99958 AC087477.1-201ENST00000465747 340 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 RPL9P9-202ENST00000466501 579 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 SNRPGP7-201ENST00000469016 106 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 AC114801.2-201ENST00000503825 781 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.3□□□□□ -2.2
FOXC2Q99958 AC016632.1-201ENST00000503994 196 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 AC021146.2-201ENST00000504736 556 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.3□□□□□ -2.2
FOXC2Q99958 AC025465.3-201ENST00000510570 311 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 MTND1P35-201ENST00000526739 508 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.3□□□□□ -2.2
FOXC2Q99958 AC109446.1-201ENST00000566172 220 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 MIR6515-201ENST00000619843 57 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.3□□□□□ -2.2
FOXC2Q99958 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.3□□□□□ -2.2
FOXC2Q99958 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
FOXC2Q99958 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
FOXC2Q99958 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.29□□□□□ -2.2
FOXC2Q99958 MIR340-201ENST00000362125 95 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 Y_RNA.6-201ENST00000362350 114 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 RNU5B-2P-201ENST00000363036 113 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 RNU6-128P-201ENST00000383976 107 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 SNORA36A-201ENST00000384221 132 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 Y_RNA.530-201ENST00000384587 101 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 MIR548F1-201ENST00000408667 84 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 ZNF885P-201ENST00000420174 1098 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 UBE2V1P8-201ENST00000437166 265 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 AL357134.1-201ENST00000445848 426 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.29□□□□□ -2.2
FOXC2Q99958 MTND1P11-201ENST00000456661 876 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.29□□□□□ -2.2
FOXC2Q99958 AC104576.1-201ENST00000524225 88 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.29□□□□□ -2.2
FOXC2Q99958 MIR3672-201ENST00000584290 82 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.29□□□□□ -2.2
FOXC2Q99958 Z98751.3-201ENST00000604447 521 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 AC009994.1-201ENST00000606889 253 ntBASIC1.29□□□□□ -2.2
FOXC2Q99958 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.29□□□□□ -2.2
FOXC2Q99958 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
FOXC2Q99958 Y_RNA.100-201ENST00000363141 102 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 RNU6-1317P-201ENST00000364582 104 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 Y_RNA.373-201ENST00000365600 103 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 RNU6-214P-201ENST00000384130 107 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 RNU6-325P-201ENST00000411132 105 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
FOXC2Q99958 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.28□□□□□ -2.2
FOXC2Q99958 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.28□□□□□ -2.2
FOXC2Q99958 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 MTCYBP18-201ENST00000501056 747 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 AC097473.1-201ENST00000508142 408 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 RNU6-1332P-201ENST00000516666 104 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.28□□□□□ -2.2
FOXC2Q99958 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.28□□□□□ -2.2
FOXC2Q99958 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.28□□□□□ -2.2
FOXC2Q99958 AC021231.3-201ENST00000558497 370 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 CYP4A27P-201ENST00000567218 190 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.28□□□□□ -2.2
FOXC2Q99958 AC012557.2-201ENST00000605919 418 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 AL133215.3-201ENST00000609801 448 ntBASIC1.28□□□□□ -2.2
FOXC2Q99958 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.27□□□□□ -2.21
FOXC2Q99958 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
FOXC2Q99958 Y_RNA.67-201ENST00000362870 100 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNA5SP325-201ENST00000363756 130 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 U3.9-201ENST00000363823 204 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 SNORD48-201ENST00000364953 64 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNU4-12P-201ENST00000365233 139 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 SNORA29-201ENST00000384183 140 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNU6-378P-201ENST00000384324 107 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNU6-784P-201ENST00000384330 106 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNU6-342P-201ENST00000384521 104 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNU6-95P-201ENST00000384697 107 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNA5SP118-201ENST00000410385 109 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RNU6-373P-201ENST00000411247 98 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 RPS26P42-201ENST00000413485 326 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 AC012306.1-201ENST00000423267 114 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
FOXC2Q99958 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.27□□□□□ -2.21
FOXC2Q99958 MTCO3P18-201ENST00000440206 761 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 SNRPEP8-201ENST00000442866 260 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms