Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL391840.1-201ENST00000571144 367 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.77□□□□□ -2.29
VAT1Q99536 U6.108-201ENST00000637764 58 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
VAT1Q99536 RNU4-21P-201ENST00000362802 126 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RNU6-1305P-201ENST00000364353 104 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RNU6-950P-201ENST00000384651 107 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
VAT1Q99536 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RNA5SP494-201ENST00000410653 129 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RNU6-57P-201ENST00000411348 103 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AC016909.1-201ENST00000415916 166 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.76□□□□□ -2.29
VAT1Q99536 RPS4XP11-201ENST00000446897 772 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.76□□□□□ -2.29
VAT1Q99536 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.76□□□□□ -2.29
VAT1Q99536 RNU7-138P-201ENST00000459479 64 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RNU7-57P-201ENST00000459540 60 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RNU6-1037P-201ENST00000459571 107 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AC025465.4-201ENST00000513422 638 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 SCARNA16.2-201ENST00000516520 172 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 RN7SKP49-201ENST00000516675 260 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.76□□□□□ -2.29
VAT1Q99536 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.76□□□□□ -2.29
VAT1Q99536 AC068790.2-201ENST00000602601 557 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AL390123.1-201ENST00000603216 237 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 AC027449.1-201ENST00000608890 407 ntBASIC0.76□□□□□ -2.29
VAT1Q99536 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.76□□□□□ -2.29
VAT1Q99536 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
VAT1Q99536 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
VAT1Q99536 MIR96-201ENST00000362288 78 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 RNU1-93P-201ENST00000364704 169 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 MIR586-201ENST00000385035 97 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 RNU6-910P-201ENST00000390844 107 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC092991.1-201ENST00000477176 376 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.75□□□□□ -2.29
VAT1Q99536 AC010493.1-201ENST00000513479 292 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 SNORA31.2-201ENST00000516019 134 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.75□□□□□ -2.29
VAT1Q99536 HIF1AP1-201ENST00000553642 175 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 MIR5695-201ENST00000579717 85 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 MTATP6P3-201ENST00000581686 676 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC022217.4-201ENST00000604389 163 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC097065.2-201ENST00000608159 533 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC087683.2-201ENST00000611384 326 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
VAT1Q99536 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 AC114482.1-201ENST00000418010 247 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 MTND3P9-201ENST00000429526 346 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 AL356010.1-201ENST00000456364 102 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 AC048334.1-201ENST00000477975 159 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.74□□□□□ -2.29
VAT1Q99536 MTND1P22-201ENST00000510572 951 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 RNU1-142P-201ENST00000516682 145 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 MRPS36P4-201ENST00000534436 298 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 SUB1P2-201ENST00000556401 297 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.74□□□□□ -2.29
VAT1Q99536 MIR3915-201ENST00000578518 97 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 AL021879.1-201ENST00000611756 288 ntBASIC0.74□□□□□ -2.29
VAT1Q99536 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 RNU6-1286P-201ENST00000383871 107 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 SNORA67.2-201ENST00000384300 149 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.73□□□□□ -2.29
VAT1Q99536 AC074290.1-201ENST00000448883 135 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 RNU7-180P-201ENST00000459240 63 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 AC007215.1-201ENST00000464893 276 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.73□□□□□ -2.29
VAT1Q99536 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.73□□□□□ -2.29
VAT1Q99536 AC025647.1-201ENST00000517879 253 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 AC060788.1-201ENST00000521318 469 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 AL513534.2-201ENST00000603836 250 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 MIR8054-201ENST00000620877 86 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 AC139792.3-201ENST00000623525 224 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 AC007494.3-201ENST00000624660 743 ntBASIC0.73□□□□□ -2.29
VAT1Q99536 MTND4P5-201ENST00000435821 1374 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 FGF7P2-201ENST00000332473 296 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 RNU6-517P-201ENST00000384362 110 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 RN7SKP200-201ENST00000410564 320 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 RNU6-1054P-201ENST00000411293 104 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 MTND2P18-201ENST00000419962 1030 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 MTCYBP8-201ENST00000422855 651 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.72□□□□□ -2.29
VAT1Q99536 MTND4P32-201ENST00000437189 1237 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AC005002.2-201ENST00000438228 269 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 RNA5SP168-201ENST00000516642 112 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 RNU6-922P-201ENST00000516753 99 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.72□□□□□ -2.29
VAT1Q99536 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VAT1Q99536 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.72□□□□□ -2.29
VAT1Q99536 MIR3124-201ENST00000582636 67 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AC146944.4-201ENST00000602697 718 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms