Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 MIR653-201ENST00000385279 96 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 RNU2-43P-201ENST00000410306 190 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 snoU13.30-201ENST00000458951 104 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 TPRKBP2-201ENST00000565969 475 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 AC006600.1-201ENST00000572529 153 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 MIR4504-201ENST00000577413 92 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 POLR3GP2-201ENST00000588366 668 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 U2.21-201ENST00000637295 81 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 RNU6-730P-201ENST00000383954 104 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 SNORA24.1-201ENST00000384401 135 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 USP9YP22-201ENST00000438971 294 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 snoU13.27-201ENST00000459278 104 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 AC011458.1-201ENST00000604034 617 ntBASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.84□□□□□ -2.54
CSMD1Q96PZ7 RNU6-502P-201ENST00000362419 108 ntBASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 MTCO2P1-201ENST00000424648 477 ntBASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 MTATP6P30-201ENST00000443540 664 ntBASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 SNORD38B-202ENST00000625943 69 ntBASIC-0.85□□□□□ -2.54
CSMD1Q96PZ7 RNU6-369P-201ENST00000362515 102 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 SNORA4.2-201ENST00000365313 147 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 MIR301A-201ENST00000385261 86 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 U8.15-201ENST00000390947 134 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 MTCO3P29-201ENST00000432119 779 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 RNU6-965P-201ENST00000516721 96 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 AC004223.2-201ENST00000590309 544 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 AP002802.2-201ENST00000605877 235 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 RNU6-743P-201ENST00000364151 106 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 AL158050.2-201ENST00000605336 568 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 MTND5P31-201ENST00000419366 1374 ntBASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.85□□□□□ -2.55
CSMD1Q96PZ7 RNA5SP117-201ENST00000365294 118 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC006366.1-201ENST00000422002 759 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC007969.2-201ENST00000441891 191 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 RNU6-118P-201ENST00000516552 102 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 SNORA72.2-201ENST00000365028 127 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 USP9YP16-201ENST00000430287 407 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC026421.1-201ENST00000519101 163 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 SUMO1P2-201ENST00000452524 304 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AL353803.5-201ENST00000599815 141 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 AC017104.5-201ENST00000637647 639 ntBASIC-0.86□□□□□ -2.55
CSMD1Q96PZ7 MIR655-201ENST00000362159 97 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 MTND1P31-201ENST00000449206 961 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AL133217.1-201ENST00000450980 425 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 SCARNA18B-201ENST00000458806 135 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU6-333P-201ENST00000459117 107 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNA5SP33-201ENST00000516687 98 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC079598.5-201ENST00000547460 117 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AP003072.5-201ENST00000623872 773 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 MTND4P8-201ENST00000514997 1362 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU6-490P-201ENST00000362985 107 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 U8.6-201ENST00000364939 135 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU6-57P-201ENST00000411348 103 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AP002001.1-203ENST00000534002 267 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC078795.3-201ENST00000602913 472 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC006380.1-201ENST00000603598 186 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC084368.1-201ENST00000620935 65 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU6-540P-201ENST00000384622 101 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU2-33P-201ENST00000410344 192 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC097462.1-201ENST00000514125 324 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU6-504P-201ENST00000516568 104 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC133485.4-201ENST00000561835 220 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AC106754.2-201ENST00000623006 233 ntBASIC-0.87□□□□□ -2.55
CSMD1Q96PZ7 AL357139.1-201ENST00000407792 426 ntBASIC-0.88□□□□□ -2.55
CSMD1Q96PZ7 AL365184.2-201ENST00000431139 435 ntBASIC-0.88□□□□□ -2.55
CSMD1Q96PZ7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms